iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113814

Ensembl Protein ID

Sb10g008610.1

UniProt Accession

A0A194YIB2; A0A194YIB2_SORBI

Genbank Protein ID

KXG19688.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G099000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g008610	Sb10g008610.1	Sb10g008610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-07	32.4	1	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 15   MrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPnltlrrliqawcee 71
           M dPvv+p G+t++r++I+ + a   +         ++   +++ ++  lvPn +lr  i +wc++
   Q: 1    MADPVVAPPGQTFERACIQACAALAFSppavaadlsQSHHSSSSSSPLVLVPNVALRTAILNWCDR 66
           99********************8888878888776655555666677789**************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MADPVVAPPG QTFERACIQA CAALAFSPPA VAADLSQSHH SSSSSSPLVL VPNVALRTAI 60
LNWCDRLALP HPAPLSPDTA HDIVRRLMPP QQRSSLAQPQ RPQTQVASSV RVRRPSVFDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGACC CCGTCGTCGC GCCACCGGGC CAGACTTTCG AGCGCGCCTG CATCCAGGCC 60
TGCGCCGCGC TCGCCTTCTC CCCGCCAGCC GTCGCCGCCG ACCTCTCTCA GTCCCACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005903	Arabidopsis lyrata	36.49	3.00e-58	218.00
IUUC-Ath-006704	Arabidopsis thaliana	36.62	4.00e-56	211.00
IUUC-Bdi-014649	Brachypodium distachyon	71.89	4.00e-171	593.00
IUUC-Bol-015923	Brassica oleracea	36.88	1.00e-56	213.00
IUUC-Bra-016715	Brassica rapa	40.86	3.00e-42	165.00
IUUC-Eeu-035014	Erinaceus europaeus	30.43	3.10e+00	25.80
IUUC-Lpe-050893	Leersia perrieri	75.91	3.00e-156	544.00
IUUC-Mac-064560	Musa acuminata	54.22	1.00e-97	349.00
IUUC-Obr-076058	Oryza brachyantha	42.62	4.00e-29	121.00
IUUC-Ogl-077033	Oryza glaberrima	74.12	4.00e-136	477.00
IUUC-Ogu-078087	Oryza glumaepatula	76.22	2.00e-112	398.00
IUUC-Oin-079818	Oryza indica	82.11	1.00e-101	361.00
IUUC-Ome-081313	Oryza meridionalis	73.97	2.00e-136	478.00
IUUC-Oni-082747	Oryza nivara	74.53	2.00e-136	478.00
IUUC-Opu-084021	Oryza punctata	78.35	7.00e-161	559.00
IUUC-Oru-084445	Oryza rufipogon	75.49	5.00e-135	474.00
IUUC-Osa-085410	Oryza sativa	74.95	3.00e-137	481.00
IUUC-Ppe-101245	Prunus persica	35.27	3.00e-58	218.00
IUUC-Sit-109782	Setaria italica	85.68	0.00e+00	676.00
IUUC-Tae-124240	Triticum aestivum	74.74	5.00e-173	600.00
IUUC-Vvi-131041	Vitis vinifera	36.78	6.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence