iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117920

Ensembl Protein ID

ENSTRUP00000034390.1

UniProt Accession

H2UBS2; H2UBS2_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rad23aa; rad23a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000013485.1	ENSTRUT00000034516.1	ENSTRUP00000034390.1
ENSTRUG00000013485.1	ENSTRUT00000034517.1	ENSTRUP00000034391.1
ENSTRUG00000013485.1	ENSTRUT00000034518.1	ENSTRUP00000034392.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.90e-18	66.2	196	234
ULD/UDP/UBQ/UBQ_PIM	8.40e-27	94.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 196  YEAMLTEIISMGYERERVVAALRASFNNPHRAVEYLLTG 234
           6889*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl+++++++e+++++tv++lKeki++e+g   +p+++qkLIyaGkiL+Ddt++++++i+++++v+++v+k+k
   Q: 1    MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGkdnFPVSCQKLIYAGKILQDDTPIKDYKIDEKNFVVVMVSKAK 78
           99*************************************************************************997 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MQITLKTLQQ QTIQIEIDPE QTVKALKEKI EAERGKDNFP VSCQKLIYAG KILQDDTPIK 60
DYKIDEKNFV VVMVSKAKPS TAATPPASEP PKPPLQDSGS TSTAAPAATV PATASTPSSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGATACACA CATTTCTCGG CTAGTTATCT TTCCAGAACG GGCAACTTCC TAAACAGACT 60
AACTGCATTC GTCAGCAACC GTTTCTTAGT TCGAAGCACA TCCGACGCGA CCTGAGACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	39.66	3.00e-35	142.00
IUUC-Atr-003116	Amborella trichopoda	39.17	1.00e-32	133.00
IUUC-Aly-005498	Arabidopsis lyrata	42.92	7.00e-41	161.00
IUUC-Ath-006676	Arabidopsis thaliana	39.06	2.00e-39	156.00
IUUC-Acl-008212	Aspergillus clavatus	36.51	4.00e-28	118.00
IUUC-Ate-010458	Aspergillus terreus	37.55	4.00e-29	122.00
IUUC-Bci-013933	Botrytis cinerea	40.17	3.00e-28	119.00
IUUC-Bdi-014253	Brachypodium distachyon	39.66	2.00e-36	146.00
IUUC-Bol-016493	Brassica oleracea	41.85	1.00e-37	150.00
IUUC-Bra-017582	Brassica rapa	41.85	2.00e-38	152.00
IUUC-Cel-018364	Caenorhabditis elegans	36.06	7.00e-18	84.30
IUUC-Cja-018946	Callithrix jacchus	67.12	4.00e-64	238.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	38.94	1.00e-29	123.00
IUUC-Cin-025741	Ciona intestinalis	41.78	3.00e-37	148.00
IUUC-Cne-027056	Cryptococcus neoformans	44.87	3.00e-12	66.20
IUUC-Dor-030358	Dipodomys ordii	65.32	4.00e-65	241.00
IUUC-Dse-031336	Dothistroma septosporum	49.17	2.00e-17	83.60
IUUC-Gmo-038528	Gadus morhua	74.07	3.00e-78	285.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.40	7.00e-17	81.30
IUUC-Gac-042298	Gasterosteus aculeatus	64.90	1.00e-104	373.00
IUUC-Gma-043743	Glycine max	38.17	2.00e-40	159.00
IUUC-Hvu-047832	Hordeum vulgare	39.24	2.00e-35	142.00
IUUC-Kpa-049314	Komagataella pastoris	35.93	3.00e-29	122.00
IUUC-Lpe-050801	Leersia perrieri	35.97	4.00e-32	132.00
IUUC-Loc-051758	Lepisosteus oculatus	58.22	3.00e-88	318.00
IUUC-Lma-053328	Leptosphaeria maculans	49.35	8.00e-14	67.80
IUUC-Meu-056459	Macropus eugenii	68.92	1.00e-69	256.00
IUUC-Mpo-057609	Magnaporthe poae	46.67	4.00e-16	78.60
IUUC-Mla-058961	Melampsora laricipopulina	46.15	1.00e-24	107.00
IUUC-Mga-060060	Meleagris gallopavo	43.24	3.00e-11	62.40
IUUC-Mvi-060220	Microbotryum violaceum	42.65	7.00e-21	95.10
IUUC-Mac-065180	Musa acuminata	38.66	5.00e-39	155.00
IUUC-Ncr-068685	Neurospora crassa	39.57	7.00e-32	131.00
IUUC-Opr-070234	Ochotona princeps	80.36	7.00e-21	94.40
IUUC-Ont-072271	Oreochromis niloticus	72.46	9.00e-119	420.00
IUUC-Oba-075872	Oryza barthii	35.59	1.00e-34	140.00
IUUC-Ogl-077021	Oryza glaberrima	35.59	1.00e-34	140.00
IUUC-Ogu-078101	Oryza glumaepatula	36.21	6.00e-37	148.00
IUUC-Oin-079727	Oryza indica	34.29	2.00e-33	137.00
IUUC-Olo-080382	Oryza longistaminata	36.21	4.00e-37	148.00
IUUC-Ome-081652	Oryza meridionalis	36.21	5.00e-37	148.00
IUUC-Oni-082847	Oryza nivara	35.59	1.00e-34	140.00
IUUC-Opu-083789	Oryza punctata	35.80	3.00e-36	145.00
IUUC-Oru-084816	Oryza rufipogon	37.66	1.00e-33	137.00
IUUC-Osa-086112	Oryza sativa	37.66	1.00e-33	137.00
IUUC-Ola-086474	Oryzias latipes	66.23	2.00e-85	308.00
IUUC-Olu-087843	Ostreococcus lucimarinus	41.41	3.00e-39	155.00
IUUC-Pan-092140	Papio anubis	67.12	1.00e-64	239.00
IUUC-Pno-095064	Phaeosphaeria nodorum	50.00	7.00e-15	74.70
IUUC-Pfo-096607	Poecilia formosa	67.82	3.00e-115	408.00
IUUC-Pop-099416	Populus trichocarpa	40.60	8.00e-42	164.00
IUUC-Pgr-103618	Puccinia graminis	35.64	8.00e-26	111.00
IUUC-Ptt-103717	Puccinia triticina	47.29	7.00e-25	107.00
IUUC-Pte-104303	Pyrenophora teres	51.59	3.00e-20	92.80
IUUC-Pyt-104580	Pyrenophora triticirepentis	51.59	4.00e-20	92.40
IUUC-Sce-106214	Saccharomyces cerevisiae	34.59	7.00e-13	68.20
IUUC-Sja-107851	Schizosaccharomyces japonicus	41.32	3.00e-39	155.00
IUUC-Spo-108298	Schizosaccharomyces pombe	38.80	7.00e-39	154.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	45.10	8.00e-17	81.30
IUUC-Sar-112925	Sorex araneus	64.44	2.00e-55	209.00
IUUC-Sbi-113871	Sorghum bicolor	39.39	1.00e-36	147.00
IUUC-Tsy-118836	Tarsius syrichta	72.79	3.00e-36	145.00
IUUC-Tni-120493	Tetraodon nigroviridis	76.41	3.00e-133	468.00
IUUC-Tre-121911	Trichoderma reesei	40.00	2.00e-26	112.00
IUUC-Tae-124646	Triticum aestivum	39.66	9.00e-36	144.00
IUUC-Tur-126610	Triticum urartu	39.66	1.00e-35	144.00
IUUC-Tbe-127493	Tupaia belangeri	73.19	4.00e-37	149.00
IUUC-Uma-129484	Ustilago maydis	51.79	7.00e-12	65.10
IUUC-Vda-129946	Verticillium dahliae	47.20	3.00e-18	85.90
IUUC-Vvi-130842	Vitis vinifera	39.39	6.00e-39	154.00
IUUC-Xma-133647	Xiphophorus maculatus	80.26	2.00e-81	295.00
IUUC-Yli-134615	Yarrowia lipolytica	44.66	3.00e-39	155.00
IUUC-Zma-135678	Zea mays	39.57	6.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence