iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109625

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377609

Gene Name

SELMODRAFT_420048

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_420048	EFJ18583	EFJ18583

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.70e-63	214.4	228	532

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N gN+C+ N +LQcLs +++l+ +lle +++ +++++     + +++++lq+    +  +++  +sp ++l+ l+++ +++   +q+Da+Ef++f +
   Q: 228  CGLINCGNSCFANVILQCLSYTRPLAAYLLEgSHRAECRRN-----DWCFMCELQDHALRVF-NSEVPFSPFRILSRLRDIGNHLGYGRQEDAHEFMRFAV 322
           7******************************8888888776.....56*********99995.56679********************************* PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +         ++          e++ +  +++++li+ +F+g+l+sq+kc +c+++s+r+e+++dl ++++g  e    sl+d L++ft++e l+
   Q: 323  DSMQSIC--------LDQ-------FGGEKQVDSRSQETTLIQYIFGGHLQSQVKCMQCGHESNRYENMMDLAVEIQGAVE----SLEDGLAQFTAPEWLD 404
           *******........233.......3334678899999*****************************************97....8*************** PP
   S: 202  genkyycekckkkqe....aekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslss...GHY 295
           genky+c++ ++       + k+l++ + P++L++ LkRf   ++ ++  k+nk+v+fp+ L++sp+++ + +k   +  Y+L+avvvH   l+    GHY
   Q: 405  GENKYKCDRWCDVWAiplfSCKRLSVYEAPNILTIALKRF---QS-GKFGKLNKRVTFPEALNISPYMSGEGDK---PPLYRLYAVVVHVDMLNAsffGHY 498
           *********998777888889*******************...33.4557********************6655...9***********995554455*** PP
   S: 296  vayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++yv++ +g W+     kV+ev+ e+v +   ++aY+l+Y r
   Q: 499  ICYVRDMTGTWY-----KVKEVDTEKVMS---QKAYMLMYSR 532
           ************.....59**********...9*******98 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MHERVEVDVP ALLLTLVIVA LVSLGLIHQV RIRAARQIEL QRLQQILAAE NEQHEKLAEQ 60
EYTSMLATPR NSTTISSPNP PQQQQLAAAS LCAVCDSPTN SRCSRCKSIH YCSSKCQVTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATGAGC GCGTGGAAGT GGATGTTCCA GCGCTGCTGT TGACACTCGT GATCGTCGCG 60
CTGGTGAGCT TGGGTCTGAT CCACCAGGTG AGAATCCGGG CAGCAAGGCA GATCGAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032710--NTF2-like_dom
IPR001394--Peptidase_C19_UCH
IPR004027--SEC_C_motif
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF02810--SEC-C
PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_420048

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	61.54	8.00e-127	447.00
IUUC-Atr-002997	Amborella trichopoda	46.24	9.00e-135	473.00
IUUC-Aly-005863	Arabidopsis lyrata	54.55	2.00e-146	511.00
IUUC-Ath-007334	Arabidopsis thaliana	48.19	4.00e-150	524.00
IUUC-Bol-015083	Brassica oleracea	55.22	9.00e-148	516.00
IUUC-Bra-017569	Brassica rapa	55.43	1.00e-145	509.00
IUUC-Gma-042958	Glycine max	54.33	5.00e-148	517.00
IUUC-Lpe-051385	Leersia perrieri	48.89	4.00e-110	392.00
IUUC-Mtr-057748	Medicago truncatula	52.75	2.00e-144	505.00
IUUC-Mac-065096	Musa acuminata	68.12	4.00e-143	501.00
IUUC-Oba-075131	Oryza barthii	63.79	9.00e-129	454.00
IUUC-Obr-076763	Oryza brachyantha	54.53	3.00e-137	482.00
IUUC-Ogl-077264	Oryza glaberrima	54.08	9.00e-136	477.00
IUUC-Ogu-078646	Oryza glumaepatula	54.08	4.00e-136	478.00
IUUC-Oin-079613	Oryza indica	63.79	3.00e-129	455.00
IUUC-Olo-080250	Oryza longistaminata	54.08	2.00e-136	479.00
IUUC-Ome-081416	Oryza meridionalis	54.08	3.00e-136	479.00
IUUC-Oni-082102	Oryza nivara	53.86	5.00e-135	474.00
IUUC-Opu-083135	Oryza punctata	53.65	4.00e-135	475.00
IUUC-Oru-084644	Oryza rufipogon	54.08	5.00e-136	478.00
IUUC-Osa-086195	Oryza sativa	54.61	1.00e-129	456.00
IUUC-Ppa-095936	Physcomitrella patens	58.03	6.00e-153	534.00
IUUC-Pop-099611	Populus trichocarpa	49.72	4.00e-149	521.00
IUUC-Ppe-101845	Prunus persica	47.67	4.00e-134	470.00
IUUC-Sit-109798	Setaria italica	53.29	1.00e-140	493.00
IUUC-Sly-111333	Solanum lycopersicum	55.02	7.00e-145	506.00
IUUC-Stu-112696	Solanum tuberosum	52.76	8.00e-96	342.00
IUUC-Sbi-113982	Sorghum bicolor	53.16	2.00e-139	489.00
IUUC-Tca-121521	Theobroma cacao	50.83	2.00e-154	538.00
IUUC-Tur-126423	Triticum urartu	61.54	4.00e-127	448.00
IUUC-Vvi-130927	Vitis vinifera	55.24	5.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence