iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006302

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348713

Gene Name

UFO; ARALYDRAFT_890680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_103474.1	scaffold_103474.1	scaffold_103474.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	96.38	0.00e+00	759.00	IUUC-Ath-006968

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDSNVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRIIA 60
FLPPPAFFRT RCVCKRFYSL LFSNAFLETY LQLLPLGHNC FLFFKHKTLK SYIYKRGGGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAATCCT AAACACTAAA ATGGATTCAA ATGTGTTCAT CAATAACCCA TCTTTAACCT 60
TACCTTTCTC TTACACCTTT ACCAGTAGCA GCAACAGTAG CACAACCACA AGCACCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0006355--P:regulation of transcription, DNA-templated
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_890680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000610	Aegilops tauschii	38.95	2.00e-33	134.00
IUUC-Atr-002850	Amborella trichopoda	48.95	1.00e-93	335.00
IUUC-Ath-006968	Arabidopsis thaliana	96.38	0.00e+00	759.00
IUUC-Bdi-014051	Brachypodium distachyon	40.34	7.00e-42	164.00
IUUC-Bol-015604	Brassica oleracea	91.46	0.00e+00	701.00
IUUC-Bra-017678	Brassica rapa	90.99	0.00e+00	706.00
IUUC-Csv-026144	Ciona savignyi	31.58	1.00e-02	31.60
IUUC-Dse-031274	Dothistroma septosporum	26.67	8.00e-04	34.30
IUUC-Fal-037227	Ficedula albicollis	28.89	3.00e-03	34.30
IUUC-Gma-043918	Glycine max	67.49	5.00e-142	496.00
IUUC-Lch-049855	Latimeria chalumnae	25.52	1.40e-02	33.50
IUUC-Lpe-050979	Leersia perrieri	40.89	2.00e-68	252.00
IUUC-Mtr-058083	Medicago truncatula	68.00	4.00e-148	517.00
IUUC-Mac-065290	Musa acuminata	54.95	7.00e-76	276.00
IUUC-Ncr-068766	Neurospora crassa	30.16	2.40e-01	30.00
IUUC-Oba-075643	Oryza barthii	37.50	6.00e-33	133.00
IUUC-Obr-076079	Oryza brachyantha	43.24	2.00e-48	184.00
IUUC-Ogl-077787	Oryza glaberrima	42.70	9.00e-57	213.00
IUUC-Ogu-078033	Oryza glumaepatula	37.59	4.00e-44	171.00
IUUC-Oin-079846	Oryza indica	46.79	1.00e-59	223.00
IUUC-Ome-081692	Oryza meridionalis	43.93	1.00e-58	219.00
IUUC-Oni-082165	Oryza nivara	41.64	6.00e-46	177.00
IUUC-Opu-083728	Oryza punctata	43.82	9.00e-61	226.00
IUUC-Oru-084676	Oryza rufipogon	43.93	1.00e-58	219.00
IUUC-Osa-085876	Oryza sativa	43.93	1.00e-58	219.00
IUUC-Pan-091992	Papio anubis	28.12	1.40e-02	32.00
IUUC-Ppa-095856	Physcomitrella patens	22.11	4.00e-11	61.60
IUUC-Pop-099723	Populus trichocarpa	66.67	1.00e-157	548.00
IUUC-Ppe-101645	Prunus persica	65.68	2.00e-145	508.00
IUUC-Smo-109217	Selaginella moellendorffii	45.57	2.00e-88	318.00
IUUC-Sly-111026	Solanum lycopersicum	60.98	2.00e-137	481.00
IUUC-Stu-111937	Solanum tuberosum	60.87	3.00e-139	487.00
IUUC-Sbi-114342	Sorghum bicolor	44.00	8.00e-58	217.00
IUUC-Tca-121846	Theobroma cacao	70.07	7.00e-159	552.00
IUUC-Tre-122147	Trichoderma reesei	26.67	3.80e-01	30.00
IUUC-Tae-125944	Triticum aestivum	45.17	2.00e-58	218.00
IUUC-Tur-126494	Triticum urartu	23.32	3.00e-17	82.40
IUUC-Vvi-130852	Vitis vinifera	68.17	1.00e-146	512.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence