iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057910

Ensembl Protein ID

KEH34421

UniProt Accession

A0A072UYD4; A0A072UYD4_MEDTR

Genbank Protein ID

KEH34421.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g466220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g466220	KEH34421	KEH34421

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-30	104.9	233	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+Cp+slelM+dPv+++sG+ty+r+ I+ w++ g + cP+t+q+l++++l+Pn+t+++li +wce+n++
   Q: 233  VPPDFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTHQTLAHTNLIPNYTVKALIANWCESNNV 305
           8********************************************************************9986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MMLKMLVDSI SSFLHSSFSG NMNSETVSKY YQKTEVILKL LKPIIDTFAN SEPTSDEVLS 60
MTFEELGHAV DEVKEYVENW HLLSSKVYFV MQVDPLISRI WTSSLKVLQQ LKASKQFPND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGTTGA AAATGCTTGT TGACAGCATA TCCTCATTTT TGCATTCATC ATTTTCTGGA 60
AACATGAACT CAGAAACAGT CTCAAAATAT TACCAGAAGA CTGAAGTGAT ACTTAAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_3g466220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	50.18	0.00e+00	671.00
IUUC-Atr-002793	Amborella trichopoda	55.63	0.00e+00	829.00
IUUC-Aly-006261	Arabidopsis lyrata	58.30	0.00e+00	855.00
IUUC-Ath-006925	Arabidopsis thaliana	57.93	0.00e+00	848.00
IUUC-Bdi-014197	Brachypodium distachyon	54.01	0.00e+00	706.00
IUUC-Bol-015762	Brassica oleracea	54.47	0.00e+00	788.00
IUUC-Bra-018049	Brassica rapa	67.25	2.00e-139	490.00
IUUC-Gma-043920	Glycine max	80.98	0.00e+00	1267.00
IUUC-Hvu-047089	Hordeum vulgare	53.66	0.00e+00	741.00
IUUC-Lpe-051326	Leersia perrieri	53.98	0.00e+00	711.00
IUUC-Mac-064791	Musa acuminata	80.97	2.00e-128	452.00
IUUC-Oba-075484	Oryza barthii	54.10	0.00e+00	676.00
IUUC-Obr-076317	Oryza brachyantha	53.98	0.00e+00	682.00
IUUC-Ogl-077857	Oryza glaberrima	54.10	0.00e+00	677.00
IUUC-Ogu-078826	Oryza glumaepatula	54.22	0.00e+00	680.00
IUUC-Oin-079538	Oryza indica	54.10	0.00e+00	677.00
IUUC-Olo-080425	Oryza longistaminata	53.57	0.00e+00	649.00
IUUC-Ome-081524	Oryza meridionalis	54.22	0.00e+00	681.00
IUUC-Oni-082077	Oryza nivara	54.10	0.00e+00	677.00
IUUC-Opu-083165	Oryza punctata	54.35	0.00e+00	687.00
IUUC-Oru-085180	Oryza rufipogon	54.22	0.00e+00	688.00
IUUC-Osa-085315	Oryza sativa	54.22	0.00e+00	687.00
IUUC-Ppa-095860	Physcomitrella patens	65.67	6.00e-105	374.00
IUUC-Pop-099220	Populus trichocarpa	72.93	0.00e+00	800.00
IUUC-Ptt-103922	Puccinia triticina	32.14	1.00e-09	56.60
IUUC-Smo-108813	Selaginella moellendorffii	62.37	2.00e-82	300.00
IUUC-Sit-110349	Setaria italica	53.14	0.00e+00	714.00
IUUC-Sly-111082	Solanum lycopersicum	60.79	0.00e+00	873.00
IUUC-Stu-112751	Solanum tuberosum	60.24	0.00e+00	916.00
IUUC-Sbi-114085	Sorghum bicolor	52.56	0.00e+00	690.00
IUUC-Tca-121129	Theobroma cacao	70.73	0.00e+00	1092.00
IUUC-Tae-125641	Triticum aestivum	52.66	0.00e+00	733.00
IUUC-Tur-126525	Triticum urartu	47.44	0.00e+00	651.00
IUUC-Vvi-131364	Vitis vinifera	67.26	0.00e+00	1023.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence