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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105367
UUCD1 version UUC-RaN-00231
Ensembl Protein ID ENSRNOP00000069008.1
UniProt Accession A0A0G2JU89; A0A0G2JU89_RAT
Genbank Protein ID ENSRNOP00000069008
Protein Name E3 ubiquitin-protein ligase UBR4
Genbank Nucleotide ID AABR07050238
Gene Name Ubr4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000018183.7 ENSRNOT00000039663.5 ENSRNOP00000032156.4
ENSRNOG00000018183.7 ENSRNOT00000082138.1 ENSRNOP00000069008.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/N-recognin/UBR-box 96.12 0.00e+00 5806.00 IUUC-Hsa-046955
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MATSGGEEAA AAAPAPGAPA TGQDTTPGWE VAVRPLLSAS YSAFEMKELP QLVASVIESE 60
SEILHHEKQY EPFYSSFVAL STHYITTVCS LIPRNQLQSV AAACKVLIEF SLLRLENPDE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105367|E3,UBR-box|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCCGGAGGGA GCCGCAGTAG TACGACGAAA GATGGCGACG AGCGGCGGCG AAGAGGCGGC 60
GGCAGCAGCT CCAGCGCCCG GAGCCCCGGC AACCGGGCAG GACACGACCC CGGGCTGGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105367|E3,UBR-box|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR
PROSITE

PS51157--ZF_UBR
Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR
SMART

SM00396--ZnF_UBR1
Gene Ontology

GO:0008270--F:zinc ion binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000915 Aegilops tauschii 33.93 0.00e+00 900.00
IUUC-Aml-001346 Ailuropoda melanoleuca 95.92 0.00e+00 5935.00
IUUC-Atr-002587 Amborella trichopoda 34.69 4.00e-146 514.00
IUUC-Apl-003678 Anas platyrhynchos 91.77 0.00e+00 9195.00
IUUC-Aca-004517 Anolis carolinensis 92.69 0.00e+00 915.00
IUUC-Aly-006117 Arabidopsis lyrata 33.55 0.00e+00 825.00
IUUC-Ath-007289 Arabidopsis thaliana 33.80 0.00e+00 822.00
IUUC-Ame-011965 Astyanax mexicanus 82.51 0.00e+00 4782.00
IUUC-Bta-012498 Bos taurus 94.96 0.00e+00 9393.00
IUUC-Bdi-014555 Brachypodium distachyon 32.16 0.00e+00 905.00
IUUC-Bol-015522 Brassica oleracea 33.43 0.00e+00 834.00
IUUC-Bra-017090 Brassica rapa 33.45 0.00e+00 770.00
IUUC-Cel-018504 Caenorhabditis elegans 25.73 7.00e-161 563.00
IUUC-Cja-018983 Callithrix jacchus 96.08 0.00e+00 5928.00
IUUC-Cfa-020612 Canis familiaris 95.81 0.00e+00 5965.00
IUUC-Cpo-021700 Cavia porcellus 96.65 0.00e+00 9562.00
IUUC-Csa-023771 Chlorocebus sabaeus 96.18 0.00e+00 5890.00
IUUC-Cho-024474 Choloepus hoffmanni 87.28 0.00e+00 3659.00
IUUC-Cin-025247 Ciona intestinalis 57.71 0.00e+00 1027.00
IUUC-Csv-026255 Ciona savignyi 57.58 0.00e+00 1051.00
IUUC-Dre-028796 Danio rerio 83.75 0.00e+00 5111.00
IUUC-Dno-030056 Dasypus novemcinctus 95.15 0.00e+00 5891.00
IUUC-Dor-030711 Dipodomys ordii 94.15 0.00e+00 3453.00
IUUC-Dme-032113 Drosophila melanogaster 48.16 0.00e+00 1727.00
IUUC-Ete-032334 Echinops telfairi 95.15 0.00e+00 3492.00
IUUC-Eca-033327 Equus caballus 95.84 0.00e+00 5982.00
IUUC-Eeu-034698 Erinaceus europaeus 85.33 0.00e+00 1214.00
IUUC-Fca-035430 Felis catus 95.68 0.00e+00 5886.00
IUUC-Fal-037566 Ficedula albicollis 91.40 0.00e+00 9124.00
IUUC-Gmo-038674 Gadus morhua 83.14 0.00e+00 8053.00
IUUC-Gga-040641 Gallus gallus 92.22 0.00e+00 9239.00
IUUC-Gac-041870 Gasterosteus aculeatus 83.50 0.00e+00 8353.00
IUUC-Gma-042722 Glycine max 34.20 0.00e+00 866.00
IUUC-Ggo-045360 Gorilla gorilla 95.74 0.00e+00 9502.00
IUUC-Hsa-046955 Homo sapiens 96.09 0.00e+00 9515.00
IUUC-Hvu-047255 Hordeum vulgare 33.87 0.00e+00 896.00
IUUC-Itr-048714 Ictidomys tridecemlineatus 93.53 0.00e+00 3864.00
IUUC-Lch-049893 Latimeria chalumnae 80.33 0.00e+00 4994.00
IUUC-Lpe-050948 Leersia perrieri 33.41 0.00e+00 822.00
IUUC-Loc-052019 Lepisosteus oculatus 83.26 0.00e+00 8186.00
IUUC-Laf-054238 Loxodonta africana 94.42 0.00e+00 5839.00
IUUC-Mcc-054905 Macaca mulatta 96.20 0.00e+00 5925.00
IUUC-Meu-056297 Macropus eugenii 86.92 0.00e+00 8437.00
IUUC-Mtr-058169 Medicago truncatula 34.16 0.00e+00 847.00
IUUC-Mga-059621 Meleagris gallopavo 91.70 0.00e+00 9197.00
IUUC-Mmr-061395 Microcebus murinus 98.92 0.00e+00 2991.00
IUUC-Mdo-063037 Monodelphis domestica 91.51 0.00e+00 4631.00
IUUC-Mmu-063200 Mus musculus 97.94 0.00e+00 5989.00
IUUC-Mac-065267 Musa acuminata 33.00 0.00e+00 786.00
IUUC-Mpu-066639 Mustela putorius furo 95.98 0.00e+00 5943.00
IUUC-Mlu-067172 Myotis lucifugus 96.29 0.00e+00 9542.00
IUUC-Ncr-068935 Neurospora crassa 31.11 3.90e-01 30.00
IUUC-Nle-069162 Nomascus leucogenys 95.72 0.00e+00 4697.00
IUUC-Opr-070567 Ochotona princeps 88.24 0.00e+00 1868.00
IUUC-Ont-072364 Oreochromis niloticus 83.89 0.00e+00 8281.00
IUUC-Oan-072804 Ornithorhynchus anatinus 82.03 0.00e+00 1402.00
IUUC-Ocu-074637 Oryctolagus cuniculus 95.96 0.00e+00 5907.00
IUUC-Oba-075215 Oryza barthii 33.73 0.00e+00 823.00
IUUC-Obr-076704 Oryza brachyantha 34.12 0.00e+00 873.00
IUUC-Ogl-077593 Oryza glaberrima 35.51 0.00e+00 648.00
IUUC-Ogu-078732 Oryza glumaepatula 33.65 0.00e+00 826.00
IUUC-Oin-079805 Oryza indica 32.49 0.00e+00 733.00
IUUC-Olo-080261 Oryza longistaminata 33.71 0.00e+00 829.00
IUUC-Ome-081392 Oryza meridionalis 33.62 0.00e+00 865.00
IUUC-Oni-082086 Oryza nivara 33.71 0.00e+00 827.00
IUUC-Opu-083535 Oryza punctata 33.77 0.00e+00 832.00
IUUC-Oru-084735 Oryza rufipogon 33.71 0.00e+00 827.00
IUUC-Ola-086799 Oryzias latipes 83.36 0.00e+00 8258.00
IUUC-Olu-087777 Ostreococcus lucimarinus 27.32 2.00e-84 309.00
IUUC-Oga-088126 Otolemur garnettii 94.62 0.00e+00 1548.00
IUUC-Oar-090428 Ovis aries 93.44 0.00e+00 9205.00
IUUC-Ptr-091407 Pan troglodytes 96.13 0.00e+00 9519.00
IUUC-Pan-091777 Papio anubis 96.04 0.00e+00 9495.00
IUUC-Psi-093587 Pelodiscus sinensis 91.78 0.00e+00 9252.00
IUUC-Ppa-095781 Physcomitrella patens 34.33 0.00e+00 919.00
IUUC-Pfo-097449 Poecilia formosa 81.42 0.00e+00 5084.00
IUUC-Pab-098450 Pongo abelii 94.91 0.00e+00 9372.00
IUUC-Pop-100041 Populus trichocarpa 33.93 0.00e+00 815.00
IUUC-Pca-100663 Procavia capensis 89.78 0.00e+00 2850.00
IUUC-Ppe-101386 Prunus persica 33.83 0.00e+00 811.00
IUUC-Pva-102701 Pteropus vampyrus 95.12 0.00e+00 7478.00
IUUC-Sha-107490 Sarcophilus harrisii 91.33 0.00e+00 5677.00
IUUC-Smo-109103 Selaginella moellendorffii 33.06 0.00e+00 908.00
IUUC-Sit-110670 Setaria italica 34.20 0.00e+00 887.00
IUUC-Sly-110952 Solanum lycopersicum 34.78 0.00e+00 812.00
IUUC-Stu-112624 Solanum tuberosum 35.60 1.00e-130 461.00
IUUC-Sar-113180 Sorex araneus 88.63 0.00e+00 4169.00
IUUC-Sbi-114596 Sorghum bicolor 31.56 0.00e+00 928.00
IUUC-Ssc-115377 Sus scrofa 98.72 0.00e+00 2987.00
IUUC-Tgu-117330 Taeniopygia guttata 90.05 0.00e+00 9022.00
IUUC-Tru-117635 Takifugu rubripes 80.34 0.00e+00 5034.00
IUUC-Tsy-119551 Tarsius syrichta 91.81 0.00e+00 4150.00
IUUC-Tni-119727 Tetraodon nigroviridis 80.23 0.00e+00 5022.00
IUUC-Tca-121017 Theobroma cacao 34.18 0.00e+00 867.00
IUUC-Tae-122892 Triticum aestivum 35.37 2.00e-25 109.00
IUUC-Tur-126292 Triticum urartu 33.93 0.00e+00 898.00
IUUC-Ttr-128332 Tursiops truncatus 95.74 0.00e+00 4962.00
IUUC-Vpa-130615 Vicugna pacos 93.50 0.00e+00 2571.00
IUUC-Vvi-131435 Vitis vinifera 33.99 0.00e+00 815.00
IUUC-Xtr-132130 Xenopus tropicalis 89.93 0.00e+00 2100.00
IUUC-Xma-133859 Xiphophorus maculatus 81.78 0.00e+00 5076.00
Created Date 25-Jun-2017

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