iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109649

Ensembl Protein ID

EFJ05369

UniProt Accession

D8RM07; D8RM07_SELML

Genbank Protein ID

EFJ05369.1; EFJ26805.1

Protein Name

Putative uncharacterized protein SHL1A-1; Putative uncharacterized protein SHL1A-2

Genbank Nucleotide ID

GL377727; GL377583

Gene Name

SHL1A-1; SHL1A-2; SELMODRAFT_412601; SELMODRAFT_431611

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_431611	EFJ05369	EFJ05369

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.10e-10	39.3	139	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +v+Ce+C++wfHp C +l+  +++++ e ++Cp+C+
   Q: 139  YC-KCEMPYNPDDLMVQCEECKDWFHPSCIGLP-VDQVKKMESYYCPDCS 186
           78.7*****************************.555666666******7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVNKGVKKVL DSYTIKGTNK TIKVGDAVLM RAQDPEKPPY VARVEQIEAD TKNNAKVRVR 60
WYYRPEESMG GRRQFHGFKE LFLSDHYDVQ SADTIEGKCI VHTFKNYTKL ESVASEDYFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTAACA AAGGAGTGAA GAAAGTGCTC GACTCGTACA CTATCAAGGG GACCAACAAG 60
ACCATCAAAG GTACGTGCTT TCCTCAGTGC ATGTAGAGAG GAGAGGCAGC ATTCTTCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_412601; smo:SELMODRAFT_431611

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	72.27	1.00e-93	334.00
IUUC-Aly-005717	Arabidopsis lyrata	71.28	1.00e-86	311.00
IUUC-Ath-007631	Arabidopsis thaliana	71.28	8.00e-87	311.00
IUUC-Bgr-012210	Blumeria graminis	46.15	1.00e-06	47.00
IUUC-Bta-013233	Bos taurus	27.82	5.00e-08	53.90
IUUC-Bdi-014153	Brachypodium distachyon	64.09	2.00e-82	297.00
IUUC-Bol-016238	Brassica oleracea	66.36	2.00e-88	317.00
IUUC-Bra-017570	Brassica rapa	66.36	4.00e-88	316.00
IUUC-Cgl-026411	Colletotrichum gloeosporioides	34.55	5.00e-06	44.70
IUUC-Cne-026894	Cryptococcus neoformans	46.55	4.00e-10	58.90
IUUC-Dse-031262	Dothistroma septosporum	34.69	6.00e-05	42.40
IUUC-Gma-043039	Glycine max	67.27	4.00e-89	319.00
IUUC-Hvu-047723	Hordeum vulgare	57.21	2.00e-73	267.00
IUUC-Kpa-049245	Komagataella pastoris	30.56	3.00e-05	44.30
IUUC-Lpe-051400	Leersia perrieri	64.57	3.00e-81	293.00
IUUC-Mtr-057710	Medicago truncatula	68.18	3.00e-84	303.00
IUUC-Mla-058837	Melampsora laricipopulina	32.35	9.00e-08	50.80
IUUC-Mga-060017	Meleagris gallopavo	36.92	1.00e-07	52.80
IUUC-Mvi-060256	Microbotryum violaceum	30.26	2.00e-08	54.30
IUUC-Mac-064463	Musa acuminata	71.82	7.00e-92	328.00
IUUC-Oba-075855	Oryza barthii	65.84	5.00e-82	296.00
IUUC-Ppa-095639	Physcomitrella patens	74.09	3.00e-85	306.00
IUUC-Pop-098948	Populus trichocarpa	65.00	2.00e-87	313.00
IUUC-Ppe-101758	Prunus persica	71.82	2.00e-91	327.00
IUUC-Pgr-103292	Puccinia graminis	30.36	1.00e-06	46.60
IUUC-Sja-107734	Schizosaccharomyces japonicus	33.75	2.00e-08	54.30
IUUC-Spo-108246	Schizosaccharomyces pombe	44.90	4.00e-09	57.40
IUUC-Sly-111450	Solanum lycopersicum	70.45	2.00e-91	327.00
IUUC-Stu-112123	Solanum tuberosum	70.89	5.00e-90	322.00
IUUC-Sre-115140	Sporisorium reilianum	39.62	2.00e-07	50.80
IUUC-Tca-121518	Theobroma cacao	72.27	1.00e-93	334.00
IUUC-Tur-126461	Triticum urartu	51.82	1.00e-59	221.00
IUUC-Uma-129425	Ustilago maydis	41.30	2.00e-05	44.30
IUUC-Vvi-131614	Vitis vinifera	71.36	7.00e-93	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence