iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006752

UUCD1 version

UUC-ArT-00030

Ensembl Protein ID

AT5G56560.2

UniProt Accession

Q9FJV2; F4K7Q0; FBD27_ARATH

Genbank Protein ID

BAB09873.1; BAB09873.1; AED96781.1; ANM70149.1

Protein Name

Putative FBD-associated F-box protein At5g56560

Genbank Nucleotide ID

AB013392; AB019234; CP002688; CP002688

Gene Name

At5g56560; MKN22.8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G56560	AT5G56560.2	AT5G56560.2
AT5G56560	AT5G56560.1	AT5G56560.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	32.65	2.00e-03	38.10	IUUC-Spo-108230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEKQTRLSDL PDELLLKILS ALPMFKVTLA TRLISRRWKG PWKLVPDVTF DDDDIPFKSF 60
ETFMSFVYGS FLSNDAQILD RLHLKLNQKY SASDINFWVQ VAVNRSVREL RIDLFGKTLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAAC AGACCAGGCT CAGTGACTTG CCAGATGAAT TGCTCTTGAA GATATTGTCA 60
GCACTTCCTA TGTTTAAAGT GACTTTAGCC ACACGTCTCA TATCAAGACG TTGGAAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR006566--FBD
IPR032675--L_dom-like
IPR013101--Leu-rich_rpt_2

PROSITE

PS50181--FBOX

Pfam

PF08387--FBD
PF07723--LRR_2

SMART

SM00579--FBD

KEGG

ath:AT5G56560

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000322	Aegilops tauschii	24.38	6.00e-04	37.70
IUUC-Apl-003298	Anas platyrhynchos	33.33	4.00e-03	34.30
IUUC-Aly-006243	Arabidopsis lyrata	24.76	3.00e-04	39.30
IUUC-Bdi-014513	Brachypodium distachyon	24.68	2.00e-04	39.70
IUUC-Bol-015210	Brassica oleracea	37.56	7.00e-69	254.00
IUUC-Cho-024662	Choloepus hoffmanni	29.49	4.90e-02	31.20
IUUC-Fal-037415	Ficedula albicollis	33.33	4.40e+00	24.30
IUUC-Gma-043760	Glycine max	24.55	4.00e-06	45.10
IUUC-Hvu-047066	Hordeum vulgare	32.41	1.00e-06	47.00
IUUC-Lch-049839	Latimeria chalumnae	36.36	5.00e-03	33.90
IUUC-Lpe-051609	Leersia perrieri	24.18	1.00e-11	65.50
IUUC-Mtr-058229	Medicago truncatula	24.40	1.00e-05	43.10
IUUC-Mga-059915	Meleagris gallopavo	38.24	4.00e-03	34.30
IUUC-Ont-072655	Oreochromis niloticus	38.18	4.00e-03	36.20
IUUC-Oan-073068	Ornithorhynchus anatinus	31.67	1.50e+00	27.70
IUUC-Ocu-074360	Oryctolagus cuniculus	34.62	2.10e-01	29.30
IUUC-Oba-075776	Oryza barthii	24.93	3.00e-09	58.50
IUUC-Ogl-077037	Oryza glaberrima	23.68	1.00e-03	37.00
IUUC-Ogu-078253	Oryza glumaepatula	25.64	2.00e-09	59.30
IUUC-Oin-079365	Oryza indica	24.71	1.00e-08	53.90
IUUC-Olo-080514	Oryza longistaminata	25.10	8.00e-10	58.50
IUUC-Ome-081705	Oryza meridionalis	28.33	9.00e-09	57.00
IUUC-Oni-082404	Oryza nivara	23.93	2.00e-09	58.90
IUUC-Opu-083667	Oryza punctata	26.71	4.00e-08	54.30
IUUC-Oru-085191	Oryza rufipogon	25.15	1.00e-09	59.70
IUUC-Osa-085649	Oryza sativa	25.10	1.00e-09	57.00
IUUC-Psi-093974	Pelodiscus sinensis	35.29	7.00e-03	33.50
IUUC-Pop-099374	Populus trichocarpa	27.39	3.00e-05	42.70
IUUC-Ppe-101323	Prunus persica	27.17	2.00e-04	38.90
IUUC-Pte-104249	Pyrenophora teres	70.59	9.80e-01	27.30
IUUC-Spo-108230	Schizosaccharomyces pombe	32.65	6.00e-04	38.10
IUUC-Sit-110045	Setaria italica	26.43	5.00e-08	51.60
IUUC-Tgu-116848	Taeniopygia guttata	38.24	9.50e-01	26.60
IUUC-Tca-121866	Theobroma cacao	43.40	2.00e-03	36.60
IUUC-Tae-124156	Triticum aestivum	23.84	2.00e-03	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence