iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109663

UUCD1 version

UUC-SeM-00170

Ensembl Protein ID

EFJ24309

UniProt Accession

D8QY88; D8QY88_SELML

Genbank Protein ID

EFJ24309.1; EFJ35570.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377590; GL377568

Gene Name

SELMODRAFT_59572; SELMODRAFT_69516

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_59572	EFJ24309	EFJ24309

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-08	34.0	7	61
E3 activity/RING/RING	8.40e-08	33.3	9	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           + C I lel +dPvv+ +G+ +   ++ +wlas  +  +cPv+++ ++e +++P 
   Q: 7    YDCNICLELAQDPVVTHCGHLFCWPCLYRWLASRSSctECPVCKSAVEEAKVIPI 61
           68*****************************77777779**************97 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+f+  Cl++w     s s    CP+C+
   Q: 9    CNICLELAQD-PVVTHCGHLFCWPCLYRW---LASRSSCTECPVCK 50
           99********.999***************...556888888****6 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

DGGSGSYDCN ICLELAQDPV VTHCGHLFCW PCLYRWLASR SSCTECPVCK SAVEEAKVIP 60
IYGRGKGTSD PRKKGVENIP NRPPGQRTDL PHQHRQNSHS GGGAFQQMGF SFFTGPSATT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGCGGAT CAGGTAGCTA CGATTGCAAC ATCTGCCTGG AGCTCGCGCA GGATCCGGTG 60
GTCACGCACT GCGGCCATCT CTTCTGCTGG CCCTGCCTCT ACCGCTGGCT CGCCTCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_59572; smo:SELMODRAFT_69516

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	54.55	2.00e-29	121.00
IUUC-Aml-001875	Ailuropoda melanoleuca	54.17	4.00e-21	93.60
IUUC-Atr-002444	Amborella trichopoda	50.39	1.00e-33	135.00
IUUC-Aly-006065	Arabidopsis lyrata	49.59	3.00e-31	127.00
IUUC-Ath-007267	Arabidopsis thaliana	48.78	7.00e-31	126.00
IUUC-Bta-012734	Bos taurus	54.17	4.00e-21	93.60
IUUC-Bdi-014313	Brachypodium distachyon	48.39	5.00e-30	123.00
IUUC-Bol-015663	Brassica oleracea	49.59	1.00e-31	129.00
IUUC-Bra-017113	Brassica rapa	49.59	1.00e-31	128.00
IUUC-Cel-018228	Caenorhabditis elegans	57.78	4.00e-27	114.00
IUUC-Cja-019136	Callithrix jacchus	54.17	3.00e-21	93.60
IUUC-Cfa-020308	Canis familiaris	54.17	4.00e-21	93.60
IUUC-Cpo-021347	Cavia porcellus	54.17	3.00e-21	93.60
IUUC-Cre-022829	Chlamydomonas reinhardtii	55.81	7.00e-25	103.00
IUUC-Csv-026364	Ciona savignyi	40.00	2.00e-08	52.80
IUUC-Cme-027164	Cyanidioschyzon merolae	56.92	7.00e-19	86.70
IUUC-Dre-028094	Danio rerio	52.78	9.00e-21	92.00
IUUC-Dno-029402	Dasypus novemcinctus	54.17	4.00e-21	93.60
IUUC-Dor-030373	Dipodomys ordii	54.17	4.00e-21	93.60
IUUC-Dme-031966	Drosophila melanogaster	57.14	1.00e-24	105.00
IUUC-Eca-034261	Equus caballus	54.17	4.00e-21	93.60
IUUC-Fca-036049	Felis catus	54.17	4.00e-21	93.60
IUUC-Fal-037085	Ficedula albicollis	54.17	3.00e-21	93.60
IUUC-Fox-037977	Fusarium oxysporum	36.51	2.00e-06	47.00
IUUC-Gga-040514	Gallus gallus	54.17	4.00e-21	93.60
IUUC-Gac-042258	Gasterosteus aculeatus	49.52	3.00e-25	107.00
IUUC-Gma-043248	Glycine max	52.71	3.00e-33	134.00
IUUC-Ggo-044504	Gorilla gorilla	54.17	4.00e-21	93.60
IUUC-Hsa-045707	Homo sapiens	54.17	4.00e-21	93.60
IUUC-Hvu-047043	Hordeum vulgare	63.10	6.00e-29	119.00
IUUC-Itr-048343	Ictidomys tridecemlineatus	54.17	3.00e-21	93.60
IUUC-Kpa-049392	Komagataella pastoris	30.83	7.00e-10	57.00
IUUC-Lch-050658	Latimeria chalumnae	54.17	7.00e-21	92.80
IUUC-Lpe-050836	Leersia perrieri	63.86	2.00e-31	129.00
IUUC-Mtr-058130	Medicago truncatula	60.23	3.00e-31	127.00
IUUC-Mla-059039	Melampsora laricipopulina	45.83	7.00e-08	51.20
IUUC-Mga-059554	Meleagris gallopavo	54.17	4.00e-21	93.60
IUUC-Mmr-061662	Microcebus murinus	44.00	1.00e-12	65.50
IUUC-Mac-065390	Musa acuminata	54.33	8.00e-34	135.00
IUUC-Mlu-067254	Myotis lucifugus	54.17	4.00e-21	93.60
IUUC-Nle-069850	Nomascus leucogenys	54.17	4.00e-21	93.60
IUUC-Oan-073480	Ornithorhynchus anatinus	54.17	4.00e-21	93.60
IUUC-Oba-075461	Oryza barthii	48.06	4.00e-31	127.00
IUUC-Obr-076749	Oryza brachyantha	61.45	5.00e-29	119.00
IUUC-Ogl-077553	Oryza glaberrima	65.12	2.00e-31	127.00
IUUC-Ogu-078463	Oryza glumaepatula	62.77	2.00e-31	128.00
IUUC-Oin-080177	Oryza indica	65.12	2.00e-31	127.00
IUUC-Olo-080653	Oryza longistaminata	46.97	4.00e-31	127.00
IUUC-Ome-081605	Oryza meridionalis	62.77	2.00e-31	128.00
IUUC-Oni-082458	Oryza nivara	62.77	4.00e-31	127.00
IUUC-Opu-083362	Oryza punctata	63.86	2.00e-29	122.00
IUUC-Oru-084757	Oryza rufipogon	65.12	2.00e-31	128.00
IUUC-Osa-086198	Oryza sativa	62.77	3.00e-31	127.00
IUUC-Oga-088197	Otolemur garnettii	54.05	1.00e-21	95.50
IUUC-Ptr-091106	Pan troglodytes	54.17	4.00e-21	93.60
IUUC-Psi-093323	Pelodiscus sinensis	54.17	4.00e-21	93.60
IUUC-Ppa-095474	Physcomitrella patens	62.02	4.00e-38	150.00
IUUC-Pab-097845	Pongo abelii	54.17	4.00e-21	93.60
IUUC-Pop-098889	Populus trichocarpa	52.71	2.00e-33	134.00
IUUC-Ppe-102011	Prunus persica	52.00	6.00e-33	132.00
IUUC-Pgr-103455	Puccinia graminis	40.74	3.00e-10	58.90
IUUC-Sit-109934	Setaria italica	63.86	2.00e-29	121.00
IUUC-Sly-111255	Solanum lycopersicum	51.94	6.00e-35	139.00
IUUC-Stu-112117	Solanum tuberosum	54.10	5.00e-34	136.00
IUUC-Sar-113669	Sorex araneus	54.35	8.00e-11	57.40
IUUC-Sbi-114116	Sorghum bicolor	49.61	4.00e-30	123.00
IUUC-Ssc-116228	Sus scrofa	54.17	4.00e-21	93.60
IUUC-Tgu-116886	Taeniopygia guttata	54.17	3.00e-21	93.60
IUUC-Tni-120909	Tetraodon nigroviridis	54.93	1.00e-21	95.10
IUUC-Tca-121264	Theobroma cacao	51.88	2.00e-34	138.00
IUUC-Tae-124257	Triticum aestivum	64.29	1.00e-29	122.00
IUUC-Tur-126443	Triticum urartu	64.29	1.00e-29	122.00
IUUC-Ttr-129044	Tursiops truncatus	54.17	4.00e-21	93.60
IUUC-Vpa-130365	Vicugna pacos	52.78	3.00e-20	90.90
IUUC-Vvi-131725	Vitis vinifera	53.12	4.00e-34	136.00
IUUC-Xtr-132608	Xenopus tropicalis	60.87	3.00e-22	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence