iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087452

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04031256

Gene Name

rnf6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000008902.1	ENSORLT00000011168.1	ENSORLP00000011167.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-08	33.0	640	681

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 640  CSVCINEYaqGNKLRRLPCSHEFHIHCIDRW------LSENNTCPICR 681
           ********66333999***************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

ERQRQAERLR REEAYYHFIN ELSEDEYRLM RDGNLLGTPG DVTAEELRQR LDEAKECVSS 60
QPHPEQRSQT VSAGGTEAGA ETSNSDSLLE WLNTFRRTGN ATRSGQSGNQ TWRAVSRTNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACGGCAGA GGCAGGCAGA GCGTCTTCGA CGGGAGGAAG CATATTATCA CTTCATAAAT 60
GAATTGAGTG AAGACGAGTA CCGCCTCATG AGAGATGGTA ACCTGCTGGG CACCCCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	38.27	2.00e-13	68.90
IUUC-Aml-001415	Ailuropoda melanoleuca	60.26	2.00e-94	339.00
IUUC-Apl-003834	Anas platyrhynchos	66.67	6.00e-109	388.00
IUUC-Aca-004373	Anolis carolinensis	57.76	5.00e-82	298.00
IUUC-Aly-005870	Arabidopsis lyrata	41.76	2.00e-18	86.30
IUUC-Ath-006611	Arabidopsis thaliana	42.86	1.00e-18	86.70
IUUC-Ago-007863	Ashbya gossypii	56.67	2.00e-06	47.40
IUUC-Ame-011730	Astyanax mexicanus	80.90	1.00e-115	410.00
IUUC-Bta-012763	Bos taurus	58.45	2.00e-83	303.00
IUUC-Bdi-014235	Brachypodium distachyon	38.27	9.00e-15	74.30
IUUC-Bol-015334	Brassica oleracea	41.25	5.00e-15	73.20
IUUC-Bra-017725	Brassica rapa	41.25	1.00e-15	75.10
IUUC-Cja-018980	Callithrix jacchus	64.07	2.00e-99	356.00
IUUC-Cfa-020416	Canis familiaris	59.93	2.00e-94	339.00
IUUC-Csa-023246	Chlorocebus sabaeus	63.64	4.00e-94	338.00
IUUC-Cho-024749	Choloepus hoffmanni	59.28	3.00e-92	332.00
IUUC-Cme-027313	Cyanidioschyzon merolae	50.98	4.00e-13	68.90
IUUC-Dre-028428	Danio rerio	71.90	2.00e-114	406.00
IUUC-Dno-029617	Dasypus novemcinctus	64.51	1.00e-93	337.00
IUUC-Dor-030800	Dipodomys ordii	55.04	7.00e-58	218.00
IUUC-Ete-032882	Echinops telfairi	60.61	6.00e-94	338.00
IUUC-Eca-033892	Equus caballus	59.28	1.00e-93	337.00
IUUC-Eeu-034563	Erinaceus europaeus	60.38	9.00e-70	257.00
IUUC-Fca-035765	Felis catus	59.61	3.00e-93	336.00
IUUC-Fal-036981	Ficedula albicollis	89.74	1.00e-55	211.00
IUUC-Fox-037736	Fusarium oxysporum	42.86	9.00e-15	74.30
IUUC-Gmo-039344	Gadus morhua	72.94	2.00e-132	466.00
IUUC-Ggr-039947	Gaeumannomyces graminis	53.33	3.00e-12	67.00
IUUC-Gga-041114	Gallus gallus	66.89	6.00e-108	384.00
IUUC-Gac-042220	Gasterosteus aculeatus	80.65	4.00e-135	475.00
IUUC-Gma-043870	Glycine max	36.17	3.00e-15	75.90
IUUC-Ggo-044902	Gorilla gorilla	63.64	1.00e-99	357.00
IUUC-Hsa-046548	Homo sapiens	63.25	2.00e-99	356.00
IUUC-Itr-048447	Ictidomys tridecemlineatus	58.96	8.00e-94	337.00
IUUC-Lch-050541	Latimeria chalumnae	66.33	6.00e-106	378.00
IUUC-Laf-054296	Loxodonta africana	60.68	8.00e-87	314.00
IUUC-Mcc-054858	Macaca mulatta	63.30	1.00e-93	337.00
IUUC-Meu-056296	Macropus eugenii	74.26	3.00e-53	202.00
IUUC-Mpo-057470	Magnaporthe poae	55.56	3.00e-13	70.10
IUUC-Mtr-057928	Medicago truncatula	36.56	5.00e-15	74.30
IUUC-Mga-059307	Meleagris gallopavo	66.78	3.00e-105	375.00
IUUC-Mmr-060699	Microcebus murinus	56.47	6.00e-92	331.00
IUUC-Mdo-062162	Monodelphis domestica	64.09	5.00e-98	352.00
IUUC-Mmu-064188	Mus musculus	58.86	3.00e-86	312.00
IUUC-Mac-065297	Musa acuminata	41.67	5.00e-15	73.60
IUUC-Mlu-067177	Myotis lucifugus	60.60	7.00e-88	318.00
IUUC-Nle-069127	Nomascus leucogenys	63.30	9.00e-100	357.00
IUUC-Ont-072086	Oreochromis niloticus	67.29	0.00e+00	728.00
IUUC-Oba-074984	Oryza barthii	45.90	1.00e-13	70.10
IUUC-Ogl-077250	Oryza glaberrima	45.90	1.00e-13	70.10
IUUC-Ogu-078929	Oryza glumaepatula	45.90	1.00e-13	70.50
IUUC-Oin-079559	Oryza indica	45.90	1.00e-13	70.10
IUUC-Ome-081694	Oryza meridionalis	38.89	1.00e-12	68.60
IUUC-Oni-082758	Oryza nivara	45.90	1.00e-13	70.10
IUUC-Oru-084427	Oryza rufipogon	45.90	1.00e-13	70.10
IUUC-Osa-086236	Oryza sativa	45.90	1.00e-13	70.10
IUUC-Ptr-091533	Pan troglodytes	63.25	2.00e-99	356.00
IUUC-Pan-092675	Papio anubis	63.30	5.00e-90	325.00
IUUC-Psi-093735	Pelodiscus sinensis	66.44	1.00e-104	374.00
IUUC-Pfo-096637	Poecilia formosa	65.99	0.00e+00	730.00
IUUC-Pab-098486	Pongo abelii	63.64	1.00e-99	357.00
IUUC-Pca-100143	Procavia capensis	63.79	7.00e-96	344.00
IUUC-Ppe-101738	Prunus persica	55.10	6.00e-14	70.90
IUUC-Pva-103151	Pteropus vampyrus	62.42	1.00e-90	327.00
IUUC-Pgr-103322	Puccinia graminis	42.55	4.00e-10	58.50
IUUC-Ptt-103976	Puccinia triticina	51.11	4.00e-11	61.20
IUUC-Rno-105745	Rattus norvegicus	58.59	6.00e-85	308.00
IUUC-Sha-106681	Sarcophilus harrisii	65.31	1.00e-96	347.00
IUUC-Sar-113229	Sorex araneus	58.63	5.00e-90	325.00
IUUC-Sbi-114579	Sorghum bicolor	52.00	1.00e-14	71.20
IUUC-Tgu-117477	Taeniopygia guttata	68.58	3.00e-102	365.00
IUUC-Tru-118302	Takifugu rubripes	70.14	6.00e-145	507.00
IUUC-Tsy-119338	Tarsius syrichta	47.40	3.00e-65	243.00
IUUC-Tni-119675	Tetraodon nigroviridis	81.53	3.00e-127	448.00
IUUC-Tca-120978	Theobroma cacao	45.33	2.00e-14	73.60
IUUC-Tae-124438	Triticum aestivum	40.86	4.00e-15	75.10
IUUC-Tur-126124	Triticum urartu	38.27	9.00e-14	70.10
IUUC-Tbe-127505	Tupaia belangeri	49.53	6.00e-49	188.00
IUUC-Ttr-128367	Tursiops truncatus	58.30	5.00e-66	245.00
IUUC-Vpa-130480	Vicugna pacos	63.39	3.00e-87	315.00
IUUC-Xma-133863	Xiphophorus maculatus	64.66	0.00e+00	735.00
IUUC-Yli-134656	Yarrowia lipolytica	36.23	1.00e-09	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence