iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028708

Ensembl Protein ID

ENSDARP00000003398.8

UniProt Accession

Q561Y1; Q561Y1_DANRE

Genbank Protein ID

AAH92825.1; AAI64468.1

Protein Name

Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4; Proteasome 26S subunit, non-ATPase 4b

Genbank Nucleotide ID

CU104697; BC164468

Gene Name

psmd4b; psmd4; psmd4l

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000023279.8	ENSDART00000020654.8	ENSDARP00000003398.8

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	3.30e-07	30.5	276	291
UBD/Alpha-Helix/UIM	8.2e-05	14.0	213	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqE 16
           +Ede+++ Al++S+q 
   Q: 276  TEDEQIAYALQMSMQG 291
           59************96 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEeees 20
           d+eL+lAl++S++E++++
   Q: 213  DPELALALRVSMEEQRQR 230
           99*************985 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MVLESTMVCV DNSEYMRNGD FLPTRLQAQQ DAVNIICHSK TRSNPENNVG LITMANNCEV 60
LTTLTPDTGR ILSKLHAVQP RGVISFCTGI RVAHLALKHR QGKNHKMRII AFVGSPVEDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACGTCACGT AGAGCGACAA AAAATTTCAA GATGGTGCTT GAAAGTACTA TGGTCTGGTA 60
AGAAAAAATG ACTTTATATT CTTAACAATC GATTTAGTTT GATAAACGTG ATATGATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0647--Proteasome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0031593--F:polyubiquitin binding
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

dre:550287

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008094	Aspergillus clavatus	45.02	9.00e-39	153.00
IUUC-Ang-009602	Aspergillus niger	45.45	2.00e-37	149.00
IUUC-Bgr-012200	Blumeria graminis	50.42	1.00e-49	189.00
IUUC-Bci-013904	Botrytis cinerea	51.48	2.00e-49	189.00
IUUC-Bol-015474	Brassica oleracea	50.42	1.00e-52	200.00
IUUC-Bra-018039	Brassica rapa	50.42	7.00e-53	201.00
IUUC-Cin-025469	Ciona intestinalis	56.70	9.00e-89	320.00
IUUC-Cgl-026657	Colletotrichum gloeosporioides	48.10	6.00e-39	154.00
IUUC-Cme-027212	Cyanidioschyzon merolae	40.29	1.00e-45	177.00
IUUC-Dse-031464	Dothistroma septosporum	49.37	2.00e-52	199.00
IUUC-Fox-037746	Fusarium oxysporum	45.76	1.00e-48	186.00
IUUC-Fso-038431	Fusarium solani	47.88	1.00e-49	190.00
IUUC-Ggr-039821	Gaeumannomyces graminis	47.15	7.00e-41	160.00
IUUC-Gma-044042	Glycine max	51.74	8.00e-57	214.00
IUUC-Hvu-047715	Hordeum vulgare	48.73	1.00e-51	197.00
IUUC-Kpa-049158	Komagataella pastoris	54.34	1.00e-55	209.00
IUUC-Lma-053295	Leptosphaeria maculans	51.25	4.00e-48	184.00
IUUC-Mpo-057587	Magnaporthe poae	48.19	8.00e-42	164.00
IUUC-Mla-059105	Melampsora laricipopulina	44.58	6.00e-20	91.30
IUUC-Nfi-068540	Neosartorya fischeri	46.29	6.00e-39	154.00
IUUC-Ppe-101877	Prunus persica	40.82	8.00e-69	254.00
IUUC-Pte-104114	Pyrenophora teres	50.00	2.00e-49	189.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	50.63	9.00e-53	200.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	48.39	8.00e-49	187.00
IUUC-Spo-108378	Schizosaccharomyces pombe	46.51	6.00e-51	194.00
IUUC-Sit-110284	Setaria italica	50.85	9.00e-50	191.00
IUUC-Sly-111246	Solanum lycopersicum	36.21	8.00e-62	231.00
IUUC-Stu-112695	Solanum tuberosum	36.21	5.00e-62	231.00
IUUC-Tca-121251	Theobroma cacao	40.55	1.00e-56	214.00
IUUC-Tre-122168	Trichoderma reesei	49.79	8.00e-54	203.00
IUUC-Tvi-122655	Trichoderma virens	49.79	1.00e-50	193.00
IUUC-Tae-125631	Triticum aestivum	48.73	2.00e-51	196.00
IUUC-Vda-129920	Verticillium dahliae	47.52	1.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence