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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007019
UUCD1 version UUC-ArT-00180
Ensembl Protein ID AT3G27330.1
UniProt Accession F4IWG7; F4IWG7_ARATH
Genbank Protein ID AEE77301.1
Protein Name Zinc finger (C3HC4-type RING finger) family protein
Genbank Nucleotide ID CP002686
Gene Name At3g27330
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G27330 AT3G27330.1 AT3G27330.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/MIU 41.33 3.00e-09 62.40 IUUC-Hsa-046424
UBD/Alpha-Helix/UMI 41.33 3.00e-09 62.40 IUUC-Hsa-046424
E3 activity/RING/RING 41.33 3.00e-09 62.40 IUUC-Hsa-046424
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MKVRRKLGGG CGGDVVVSWR TFFWFVILFV FSFVLFSTMF IFKGKFRPVV RSTISFSTAV 60
TARAVFRESI SSSPAVTIRE AVKLPEQTLV FLKYPQSRRL FTKDDLICVF SGSSKLRKVY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007019|UBD,MIU;UBD,UMI;E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTCTTCTCA TCATCCAAAA CCAGAAACTT TGACCGGAAA AGAATCAGAG AAGTAAAGAA 60
AAACAGAACA AAATTAAAAC AGAATTTCTT CTCTAATCCA TTACGCCGGC GATTTCGGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007019|UBD,MIU;UBD,UMI;E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR008166--Glyco_transf_92
IPR029044--Nucleotide-diphossugar_trans
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF01697--Glyco_transf_92
PF00097--zf-C3HC4
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG ath:AT3G27330
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000755 Aegilops tauschii 47.60 4.00e-46 178.00
IUUC-Aml-001573 Ailuropoda melanoleuca 40.79 2.00e-10 60.50
IUUC-Atr-002992 Amborella trichopoda 42.95 1.00e-46 179.00
IUUC-Aca-005292 Anolis carolinensis 35.00 6.00e-10 58.20
IUUC-Ame-011251 Astyanax mexicanus 37.11 4.00e-12 65.90
IUUC-Bta-013002 Bos taurus 42.67 1.00e-11 64.30
IUUC-Bol-016180 Brassica oleracea 70.46 3.00e-94 337.00
IUUC-Bra-017905 Brassica rapa 69.21 4.00e-91 327.00
IUUC-Cja-019945 Callithrix jacchus 39.02 1.00e-10 61.20
IUUC-Cin-025364 Ciona intestinalis 40.98 2.00e-09 55.80
IUUC-Csv-026245 Ciona savignyi 42.11 1.00e-09 55.80
IUUC-Dre-028519 Danio rerio 41.77 9.00e-11 60.80
IUUC-Dno-029294 Dasypus novemcinctus 41.33 1.00e-10 60.80
IUUC-Dor-030830 Dipodomys ordii 37.14 3.00e-10 59.30
IUUC-Ete-032714 Echinops telfairi 37.65 3.00e-10 59.70
IUUC-Eca-033343 Equus caballus 40.00 3.00e-10 59.70
IUUC-Fca-036403 Felis catus 42.03 2.00e-11 63.20
IUUC-Gga-040444 Gallus gallus 35.90 1.00e-08 54.30
IUUC-Gac-041735 Gasterosteus aculeatus 35.16 7.00e-10 57.00
IUUC-Gma-044332 Glycine max 47.09 4.00e-63 234.00
IUUC-Ggo-045224 Gorilla gorilla 34.69 3.00e-11 62.40
IUUC-Hsa-046424 Homo sapiens 40.26 6.00e-11 61.60
IUUC-Itr-049000 Ictidomys tridecemlineatus 37.50 3.00e-13 69.30
IUUC-Lch-050649 Latimeria chalumnae 35.29 6.00e-10 58.20
IUUC-Loc-051847 Lepisosteus oculatus 36.36 1.00e-10 60.10
IUUC-Laf-054076 Loxodonta africana 45.45 1.00e-13 68.60
IUUC-Mcc-055216 Macaca mulatta 36.62 3.00e-11 62.80
IUUC-Meu-056670 Macropus eugenii 48.98 3.00e-08 52.80
IUUC-Mpo-057316 Magnaporthe poae 29.55 2.00e-07 50.10
IUUC-Mtr-058007 Medicago truncatula 46.77 1.00e-60 226.00
IUUC-Mga-059699 Meleagris gallopavo 37.18 7.00e-09 55.10
IUUC-Mmr-061758 Microcebus murinus 48.94 4.00e-10 58.90
IUUC-Mmu-064239 Mus musculus 41.33 1.00e-10 60.80
IUUC-Mpu-066141 Mustela putorius furo 41.33 4.00e-10 58.90
IUUC-Mlu-067945 Myotis lucifugus 37.93 1.00e-10 60.50
IUUC-Nle-069068 Nomascus leucogenys 33.33 3.00e-10 59.30
IUUC-Opr-070905 Ochotona princeps 44.16 1.00e-12 67.00
IUUC-Ont-071477 Oreochromis niloticus 37.97 1.00e-10 60.10
IUUC-Oan-073218 Ornithorhynchus anatinus 50.00 6.00e-10 58.20
IUUC-Ocu-073832 Oryctolagus cuniculus 38.67 3.00e-10 59.30
IUUC-Obr-076219 Oryza brachyantha 76.47 9.00e-39 153.00
IUUC-Ogl-077658 Oryza glaberrima 51.20 2.00e-47 182.00
IUUC-Ogu-078203 Oryza glumaepatula 51.78 1.00e-44 172.00
IUUC-Oin-079383 Oryza indica 51.20 2.00e-47 182.00
IUUC-Ome-081482 Oryza meridionalis 51.20 2.00e-47 182.00
IUUC-Oni-083025 Oryza nivara 51.20 2.00e-47 182.00
IUUC-Opu-083547 Oryza punctata 47.50 1.00e-40 159.00
IUUC-Oru-084946 Oryza rufipogon 47.09 4.00e-43 168.00
IUUC-Osa-085978 Oryza sativa 51.20 2.00e-47 182.00
IUUC-Oar-089647 Ovis aries 45.33 1.00e-12 67.40
IUUC-Ptr-090516 Pan troglodytes 40.26 6.00e-11 62.00
IUUC-Pan-092240 Papio anubis 38.24 4.00e-11 62.40
IUUC-Psi-093742 Pelodiscus sinensis 50.00 1.00e-09 57.40
IUUC-Ppa-095897 Physcomitrella patens 67.31 1.00e-18 86.70
IUUC-Pfo-096441 Poecilia formosa 44.29 8.00e-12 64.30
IUUC-Pab-097729 Pongo abelii 40.26 8.00e-11 61.20
IUUC-Pop-099737 Populus trichocarpa 53.88 0.00e+00 906.00
IUUC-Pca-100552 Procavia capensis 39.73 2.00e-10 60.10
IUUC-Ppe-102024 Prunus persica 49.35 0.00e+00 822.00
IUUC-Pva-102780 Pteropus vampyrus 41.33 3.00e-10 59.30
IUUC-Rno-105461 Rattus norvegicus 41.33 3.00e-10 59.70
IUUC-Sha-107131 Sarcophilus harrisii 36.84 2.00e-09 56.20
IUUC-Sja-107948 Schizosaccharomyces japonicus 46.94 7.00e-09 54.70
IUUC-Sly-111317 Solanum lycopersicum 52.86 7.00e-54 204.00
IUUC-Stu-112783 Solanum tuberosum 55.09 3.00e-56 211.00
IUUC-Sar-113204 Sorex araneus 40.00 1.00e-08 53.50
IUUC-Sbi-113834 Sorghum bicolor 36.11 4.00e-44 171.00
IUUC-Tca-121416 Theobroma cacao 45.91 2.00e-62 231.00
IUUC-Tae-123092 Triticum aestivum 47.12 5.00e-46 177.00
IUUC-Tur-126688 Triticum urartu 74.70 6.00e-39 154.00
IUUC-Tbe-127865 Tupaia belangeri 41.18 2.00e-12 65.50
IUUC-Ttr-128988 Tursiops truncatus 41.33 3.00e-10 59.70
IUUC-Vvi-131424 Vitis vinifera 47.73 3.00e-61 228.00
IUUC-Xtr-132159 Xenopus tropicalis 39.74 5.00e-10 58.50
IUUC-Yli-134410 Yarrowia lipolytica 31.58 9.00e-08 51.60
Created Date 25-Jun-2017

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