iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017370

Ensembl Protein ID

Bra022091.1-P

UniProt Accession

M4DZZ4; M4DZZ4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022091	Bra022091.1	Bra022091.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	56.03	0.00e+00	904.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDSQPSDLFD TASQPDTAVD AYTFLEFNSQ GDSEFDFPEF RSPNAWPTPS DSISAVEPSD 60
RGGGGVPAAD HHSEASSPSS LSAKAGRGGG GGVSSSSQAD ALAAGIGNLN FEETGDDDGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCGC AACCGAGCGA TCTCTTTGAT ACGGCATCTC AGCCCGATAC GGCGGTGGAC 60
GCGTACACCT TCCTTGAATT CAATTCCCAA GGCGATTCGG AGTTCGATTT CCCAGAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

PROSITE

PS51192--HELICASE_ATP_BIND_1

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005829--C:cytosol
GO:0000932--C:P-body
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0003729--F:mRNA binding
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0048571--P:long-day photoperiodism
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009611--P:response to wounding
GO:0009863--P:salicylic acid mediated signaling pathway
GO:0010182--P:sugar mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	76.32	0.00e+00	1565.00
IUUC-Aml-002008	Ailuropoda melanoleuca	69.13	0.00e+00	1214.00
IUUC-Atr-002632	Amborella trichopoda	76.05	0.00e+00	1815.00
IUUC-Apl-003997	Anas platyrhynchos	69.21	0.00e+00	1214.00
IUUC-Aca-004322	Anolis carolinensis	33.56	3.00e-48	186.00
IUUC-Aly-006521	Arabidopsis lyrata	89.80	0.00e+00	2094.00
IUUC-Ath-007059	Arabidopsis thaliana	89.23	0.00e+00	2092.00
IUUC-Ago-007801	Ashbya gossypii	56.01	0.00e+00	904.00
IUUC-Acl-008312	Aspergillus clavatus	65.26	0.00e+00	1104.00
IUUC-Afl-008429	Aspergillus flavus	65.69	0.00e+00	1101.00
IUUC-Afu-009092	Aspergillus fumigatus	66.05	0.00e+00	1102.00
IUUC-Ani-009317	Aspergillus nidulans	65.09	0.00e+00	1097.00
IUUC-Ang-009783	Aspergillus niger	65.81	0.00e+00	1101.00
IUUC-Aor-010178	Aspergillus oryzae	65.69	0.00e+00	1101.00
IUUC-Ate-010294	Aspergillus terreus	65.81	0.00e+00	1102.00
IUUC-Ame-010774	Astyanax mexicanus	66.10	4.00e-115	408.00
IUUC-Bgr-012293	Blumeria graminis	63.20	0.00e+00	1096.00
IUUC-Bta-012382	Bos taurus	69.13	0.00e+00	1215.00
IUUC-Bci-013937	Botrytis cinerea	64.34	0.00e+00	1084.00
IUUC-Bdi-014612	Brachypodium distachyon	76.60	0.00e+00	1662.00
IUUC-Bol-015145	Brassica oleracea	96.98	0.00e+00	2186.00
IUUC-Cel-018240	Caenorhabditis elegans	57.12	0.00e+00	911.00
IUUC-Cja-019892	Callithrix jacchus	70.06	0.00e+00	1221.00
IUUC-Cfa-020700	Canis familiaris	69.13	0.00e+00	1215.00
IUUC-Cpo-021510	Cavia porcellus	69.25	0.00e+00	1215.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	63.64	0.00e+00	1030.00
IUUC-Csa-023665	Chlorocebus sabaeus	70.06	0.00e+00	1225.00
IUUC-Cin-025798	Ciona intestinalis	69.18	0.00e+00	1140.00
IUUC-Csv-025901	Ciona savignyi	66.55	0.00e+00	1161.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	62.85	0.00e+00	1055.00
IUUC-Cne-027014	Cryptococcus neoformans	64.86	0.00e+00	1151.00
IUUC-Dre-028705	Danio rerio	70.22	0.00e+00	1218.00
IUUC-Dor-030369	Dipodomys ordii	67.73	0.00e+00	1172.00
IUUC-Dme-031767	Drosophila melanogaster	63.53	0.00e+00	1113.00
IUUC-Ete-032800	Echinops telfairi	34.71	3.00e-51	196.00
IUUC-Eca-033840	Equus caballus	70.06	0.00e+00	1221.00
IUUC-Eeu-035137	Erinaceus europaeus	42.86	6.60e-01	28.10
IUUC-Fca-035466	Felis catus	69.04	0.00e+00	1211.00
IUUC-Fal-037548	Ficedula albicollis	69.72	0.00e+00	1210.00
IUUC-Fox-038023	Fusarium oxysporum	62.21	0.00e+00	1055.00
IUUC-Gmo-039285	Gadus morhua	68.44	0.00e+00	1203.00
IUUC-Ggr-039810	Gaeumannomyces graminis	63.17	0.00e+00	1083.00
IUUC-Gga-040972	Gallus gallus	70.06	0.00e+00	1222.00
IUUC-Gac-042075	Gasterosteus aculeatus	61.17	0.00e+00	1211.00
IUUC-Gma-042713	Glycine max	77.89	0.00e+00	1886.00
IUUC-Ggo-045398	Gorilla gorilla	70.06	0.00e+00	1221.00
IUUC-Hsa-046152	Homo sapiens	70.06	0.00e+00	1225.00
IUUC-Hvu-047555	Hordeum vulgare	91.46	0.00e+00	889.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	69.40	0.00e+00	1203.00
IUUC-Kpa-049205	Komagataella pastoris	50.39	0.00e+00	722.00
IUUC-Lch-049587	Latimeria chalumnae	69.90	0.00e+00	748.00
IUUC-Lpe-051059	Leersia perrieri	77.77	0.00e+00	1687.00
IUUC-Loc-051911	Lepisosteus oculatus	70.06	0.00e+00	1222.00
IUUC-Lma-053007	Leptosphaeria maculans	65.23	0.00e+00	1087.00
IUUC-Laf-054234	Loxodonta africana	69.13	0.00e+00	1215.00
IUUC-Mcc-054762	Macaca mulatta	69.13	0.00e+00	1216.00
IUUC-Meu-056677	Macropus eugenii	65.30	1.00e-120	427.00
IUUC-Mor-057147	Magnaporthe oryzae	64.54	0.00e+00	1085.00
IUUC-Mpo-057314	Magnaporthe poae	63.05	0.00e+00	1085.00
IUUC-Mtr-058329	Medicago truncatula	79.21	0.00e+00	1921.00
IUUC-Mla-059094	Melampsora laricipopulina	61.49	0.00e+00	627.00
IUUC-Mga-060126	Meleagris gallopavo	68.64	0.00e+00	1194.00
IUUC-Mvi-060373	Microbotryum violaceum	69.54	0.00e+00	1181.00
IUUC-Mmr-060628	Microcebus murinus	69.13	0.00e+00	1216.00
IUUC-Mdo-061858	Monodelphis domestica	70.06	0.00e+00	1220.00
IUUC-Mmu-064116	Mus musculus	69.94	0.00e+00	1223.00
IUUC-Mac-065136	Musa acuminata	78.09	0.00e+00	1731.00
IUUC-Mpu-066463	Mustela putorius furo	70.06	0.00e+00	1224.00
IUUC-Mlu-068098	Myotis lucifugus	70.06	0.00e+00	1223.00
IUUC-Nfi-068370	Neosartorya fischeri	66.05	0.00e+00	1102.00
IUUC-Ncr-068792	Neurospora crassa	63.76	0.00e+00	1066.00
IUUC-Nle-070102	Nomascus leucogenys	70.06	0.00e+00	1217.00
IUUC-Opr-070620	Ochotona princeps	66.50	0.00e+00	1123.00
IUUC-Ont-072685	Oreochromis niloticus	69.49	0.00e+00	1212.00
IUUC-Oan-073665	Ornithorhynchus anatinus	68.24	0.00e+00	1218.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.87	7.00e-53	202.00
IUUC-Oba-075075	Oryza barthii	74.31	0.00e+00	1394.00
IUUC-Obr-076183	Oryza brachyantha	77.07	0.00e+00	1486.00
IUUC-Ogl-077691	Oryza glaberrima	78.50	0.00e+00	1692.00
IUUC-Ogu-078423	Oryza glumaepatula	78.26	0.00e+00	1677.00
IUUC-Oin-080107	Oryza indica	78.52	0.00e+00	1694.00
IUUC-Olo-080269	Oryza longistaminata	77.96	0.00e+00	1602.00
IUUC-Ome-081779	Oryza meridionalis	78.26	0.00e+00	1675.00
IUUC-Oni-082366	Oryza nivara	78.52	0.00e+00	1693.00
IUUC-Opu-083958	Oryza punctata	77.45	0.00e+00	1699.00
IUUC-Oru-084182	Oryza rufipogon	78.52	0.00e+00	1694.00
IUUC-Osa-085285	Oryza sativa	78.63	0.00e+00	1699.00
IUUC-Ola-086954	Oryzias latipes	66.00	0.00e+00	1172.00
IUUC-Olu-087685	Ostreococcus lucimarinus	59.38	0.00e+00	964.00
IUUC-Oga-088591	Otolemur garnettii	70.06	0.00e+00	1224.00
IUUC-Oar-089417	Ovis aries	69.01	0.00e+00	1211.00
IUUC-Ptr-091510	Pan troglodytes	69.33	0.00e+00	1202.00
IUUC-Pan-091886	Papio anubis	70.06	0.00e+00	1225.00
IUUC-Psi-093755	Pelodiscus sinensis	69.01	0.00e+00	829.00
IUUC-Pma-094470	Petromyzon marinus	68.97	0.00e+00	1220.00
IUUC-Pno-094963	Phaeosphaeria nodorum	65.19	0.00e+00	1084.00
IUUC-Ppa-095479	Physcomitrella patens	73.32	0.00e+00	1624.00
IUUC-Pfo-097456	Poecilia formosa	69.45	0.00e+00	1216.00
IUUC-Pab-098075	Pongo abelii	65.50	0.00e+00	1112.00
IUUC-Pop-099557	Populus trichocarpa	78.90	0.00e+00	1894.00
IUUC-Pca-100717	Procavia capensis	74.58	4.00e-136	479.00
IUUC-Ppe-101675	Prunus persica	79.32	0.00e+00	1934.00
IUUC-Pva-103029	Pteropus vampyrus	71.92	0.00e+00	950.00
IUUC-Pgr-103318	Puccinia graminis	64.90	0.00e+00	1105.00
IUUC-Ptt-103956	Puccinia triticina	65.02	0.00e+00	1105.00
IUUC-Pte-104399	Pyrenophora teres	65.68	0.00e+00	1089.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	65.68	0.00e+00	1090.00
IUUC-Rno-105784	Rattus norvegicus	69.94	0.00e+00	1223.00
IUUC-Sce-106206	Saccharomyces cerevisiae	56.03	0.00e+00	893.00
IUUC-Sha-106566	Sarcophilus harrisii	68.96	0.00e+00	1209.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	61.04	0.00e+00	1022.00
IUUC-Spo-108258	Schizosaccharomyces pombe	56.51	0.00e+00	980.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	62.13	0.00e+00	972.00
IUUC-Sit-109760	Setaria italica	77.54	0.00e+00	1702.00
IUUC-Sly-111807	Solanum lycopersicum	78.14	0.00e+00	1900.00
IUUC-Stu-112869	Solanum tuberosum	76.68	0.00e+00	1688.00
IUUC-Sar-112950	Sorex araneus	33.57	3.00e-39	156.00
IUUC-Sbi-114863	Sorghum bicolor	77.91	0.00e+00	1686.00
IUUC-Sre-115092	Sporisorium reilianum	66.87	0.00e+00	1150.00
IUUC-Tgu-117214	Taeniopygia guttata	63.73	0.00e+00	1078.00
IUUC-Tru-118386	Takifugu rubripes	67.97	0.00e+00	1191.00
IUUC-Tsy-119550	Tarsius syrichta	65.96	9.00e-111	394.00
IUUC-Tni-120212	Tetraodon nigroviridis	60.84	0.00e+00	1170.00
IUUC-Tca-121353	Theobroma cacao	78.27	0.00e+00	1902.00
IUUC-Tre-122245	Trichoderma reesei	32.71	6.00e-50	193.00
IUUC-Tvi-122452	Trichoderma virens	61.95	0.00e+00	1041.00
IUUC-Tae-123692	Triticum aestivum	77.88	0.00e+00	1669.00
IUUC-Tur-126770	Triticum urartu	67.36	0.00e+00	1462.00
IUUC-Tme-126956	Tuber melanosporum	66.98	0.00e+00	1141.00
IUUC-Tbe-127873	Tupaia belangeri	32.43	2.00e-44	174.00
IUUC-Ttr-128212	Tursiops truncatus	65.52	0.00e+00	1110.00
IUUC-Uma-129327	Ustilago maydis	66.91	0.00e+00	1153.00
IUUC-Vda-129858	Verticillium dahliae	62.35	0.00e+00	1031.00
IUUC-Vpa-130743	Vicugna pacos	33.42	2.00e-47	184.00
IUUC-Vvi-131222	Vitis vinifera	79.24	0.00e+00	1884.00
IUUC-Xtr-131800	Xenopus tropicalis	63.78	0.00e+00	994.00
IUUC-Xma-133216	Xiphophorus maculatus	69.45	0.00e+00	1215.00
IUUC-Yli-134482	Yarrowia lipolytica	52.84	0.00e+00	856.00
IUUC-Zma-134802	Zea mays	76.92	0.00e+00	1717.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence