iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019779

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01115085

Gene Name

SYVN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000002413.2	ENSCJAT00000004656.2	ENSCJAP00000004420.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-09	37.8	288	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh++Cl  w       +++++CP+Cr
   Q: 288  CIICREEMVTGAKRLPCNHIFHTSCLRSW------FQRQQTCPTCR 327
           ********99999****************......**********8 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MFRTAVMMAA SLALTGAVVA HAYYLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFLLGKV 60
MGKVFFGQLR AAEMEHLLER SWYAVTETCL AFTVLRDDFS PRFVALTLLL XLKCSTGWLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGGTGGG GAGTGTTGTT AACCGGAGCG GCCGCTGCAG TCGCGCGGAT TGAGCGGGCT 60
TGCGGCCCTG GGTTCCTGGT GAGTGGGGCG AAGTCGGGCC CGAGTTGTGG TCGGGGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0000839--C:Hrd1p ubiquitin ligase ERAD-L complex
GO:0016021--C:integral component of membrane
GO:0005654--C:nucleoplasm
GO:0005790--C:smooth endoplasmic reticulum
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0008270--F:zinc ion binding
GO:1902236--P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:0070936--P:protein K48-linked ubiquitination
GO:0018279--P:protein N-linked glycosylation via asparagine
GO:0050821--P:protein stabilization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030970--P:retrograde protein transport, ER to cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	36.13	2.00e-49	189.00
IUUC-Aml-001539	Ailuropoda melanoleuca	97.05	0.00e+00	669.00
IUUC-Atr-002892	Amborella trichopoda	42.69	1.00e-69	257.00
IUUC-Apl-004003	Anas platyrhynchos	95.76	1.00e-65	240.00
IUUC-Aca-004799	Anolis carolinensis	95.02	1.00e-180	625.00
IUUC-Aly-006352	Arabidopsis lyrata	43.20	4.00e-69	255.00
IUUC-Ath-006773	Arabidopsis thaliana	43.20	5.00e-69	255.00
IUUC-Ago-007894	Ashbya gossypii	23.89	8.00e-14	72.00
IUUC-Acl-008041	Aspergillus clavatus	29.77	1.00e-49	191.00
IUUC-Afl-008427	Aspergillus flavus	30.52	5.00e-45	176.00
IUUC-Afu-009023	Aspergillus fumigatus	30.08	3.00e-50	193.00
IUUC-Ani-009133	Aspergillus nidulans	30.75	6.00e-53	202.00
IUUC-Ang-009612	Aspergillus niger	33.43	2.00e-50	194.00
IUUC-Aor-010045	Aspergillus oryzae	30.20	7.00e-51	195.00
IUUC-Ate-010533	Aspergillus terreus	31.08	1.00e-50	194.00
IUUC-Ame-011083	Astyanax mexicanus	90.57	3.00e-171	594.00
IUUC-Bgr-012122	Blumeria graminis	27.85	3.00e-42	167.00
IUUC-Bta-013375	Bos taurus	97.32	0.00e+00	666.00
IUUC-Bci-013675	Botrytis cinerea	37.01	4.00e-23	103.00
IUUC-Bdi-015070	Brachypodium distachyon	41.49	2.00e-66	246.00
IUUC-Bol-015674	Brassica oleracea	42.30	4.00e-69	255.00
IUUC-Bra-017516	Brassica rapa	41.84	2.00e-67	249.00
IUUC-Cel-018422	Caenorhabditis elegans	55.42	5.00e-107	381.00
IUUC-Cfa-020189	Canis familiaris	97.32	0.00e+00	666.00
IUUC-Cpo-022209	Cavia porcellus	97.05	0.00e+00	667.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	37.34	1.00e-56	213.00
IUUC-Csa-023571	Chlorocebus sabaeus	97.32	0.00e+00	665.00
IUUC-Cho-024889	Choloepus hoffmanni	85.80	5.00e-167	580.00
IUUC-Csv-026160	Ciona savignyi	58.55	5.00e-114	404.00
IUUC-Cne-027002	Cryptococcus neoformans	39.11	2.00e-65	243.00
IUUC-Cme-027285	Cyanidioschyzon merolae	34.15	8.00e-41	161.00
IUUC-Dre-027999	Danio rerio	90.25	1.00e-172	600.00
IUUC-Dno-029250	Dasypus novemcinctus	97.05	0.00e+00	669.00
IUUC-Dor-030718	Dipodomys ordii	92.63	0.00e+00	632.00
IUUC-Dse-031498	Dothistroma septosporum	34.76	4.00e-27	117.00
IUUC-Dme-031969	Drosophila melanogaster	65.23	1.00e-132	467.00
IUUC-Ete-032592	Echinops telfairi	100.00	4.00e-27	115.00
IUUC-Eca-033258	Equus caballus	97.35	0.00e+00	670.00
IUUC-Fca-035980	Felis catus	97.03	0.00e+00	665.00
IUUC-Fal-037554	Ficedula albicollis	65.86	7.00e-89	320.00
IUUC-Fox-037902	Fusarium oxysporum	30.96	9.00e-48	185.00
IUUC-Fso-038418	Fusarium solani	29.95	5.00e-42	166.00
IUUC-Gmo-039288	Gadus morhua	87.84	4.00e-170	591.00
IUUC-Ggr-040076	Gaeumannomyces graminis	31.51	2.00e-44	174.00
IUUC-Gga-040347	Gallus gallus	86.81	4.00e-65	239.00
IUUC-Gac-042347	Gasterosteus aculeatus	89.62	4.00e-170	591.00
IUUC-Gma-044123	Glycine max	42.57	1.00e-67	250.00
IUUC-Ggo-044858	Gorilla gorilla	97.34	0.00e+00	667.00
IUUC-Hsa-046412	Homo sapiens	97.35	0.00e+00	670.00
IUUC-Hvu-047279	Hordeum vulgare	41.79	2.00e-67	249.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	97.32	0.00e+00	664.00
IUUC-Kpa-049117	Komagataella pastoris	29.47	2.00e-26	114.00
IUUC-Lch-049533	Latimeria chalumnae	54.95	2.00e-58	220.00
IUUC-Lpe-051229	Leersia perrieri	31.11	6.00e-32	131.00
IUUC-Loc-052843	Lepisosteus oculatus	93.06	2.00e-121	427.00
IUUC-Lma-052997	Leptosphaeria maculans	32.03	5.00e-54	206.00
IUUC-Laf-053482	Loxodonta africana	97.32	0.00e+00	663.00
IUUC-Mcc-055075	Macaca mulatta	97.35	0.00e+00	671.00
IUUC-Meu-056683	Macropus eugenii	94.32	3.00e-140	491.00
IUUC-Mor-057082	Magnaporthe oryzae	30.42	1.00e-47	185.00
IUUC-Mpo-057573	Magnaporthe poae	29.61	2.00e-44	173.00
IUUC-Mtr-058601	Medicago truncatula	43.20	2.00e-72	266.00
IUUC-Mla-059168	Melampsora laricipopulina	38.89	9.00e-68	251.00
IUUC-Mga-059510	Meleagris gallopavo	98.80	8.00e-47	179.00
IUUC-Mvi-060515	Microbotryum violaceum	38.04	1.00e-61	231.00
IUUC-Mmr-060922	Microcebus murinus	97.34	0.00e+00	667.00
IUUC-Mdo-062491	Monodelphis domestica	95.86	0.00e+00	642.00
IUUC-Mmu-063770	Mus musculus	97.33	0.00e+00	666.00
IUUC-Mac-064789	Musa acuminata	41.99	2.00e-71	263.00
IUUC-Mpu-066107	Mustela putorius furo	96.78	0.00e+00	672.00
IUUC-Mlu-067918	Myotis lucifugus	94.87	2.00e-173	602.00
IUUC-Nfi-068389	Neosartorya fischeri	29.82	7.00e-50	192.00
IUUC-Ncr-068742	Neurospora crassa	31.34	1.00e-42	168.00
IUUC-Nle-069139	Nomascus leucogenys	97.35	0.00e+00	670.00
IUUC-Opr-070898	Ochotona princeps	99.52	6.00e-125	441.00
IUUC-Ont-071991	Oreochromis niloticus	88.34	6.00e-174	603.00
IUUC-Ocu-074065	Oryctolagus cuniculus	96.45	0.00e+00	662.00
IUUC-Oba-075221	Oryza barthii	40.30	1.00e-64	240.00
IUUC-Obr-076914	Oryza brachyantha	41.58	9.00e-62	231.00
IUUC-Ogu-078124	Oryza glumaepatula	40.30	9.00e-65	241.00
IUUC-Oin-080013	Oryza indica	38.62	3.00e-61	229.00
IUUC-Olo-080247	Oryza longistaminata	38.63	1.00e-57	216.00
IUUC-Ome-081769	Oryza meridionalis	40.90	2.00e-67	249.00
IUUC-Oni-082946	Oryza nivara	40.30	9.00e-65	241.00
IUUC-Opu-083268	Oryza punctata	34.97	9.00e-48	184.00
IUUC-Oru-085114	Oryza rufipogon	40.30	9.00e-65	241.00
IUUC-Osa-085829	Oryza sativa	40.90	1.00e-67	250.00
IUUC-Ola-087449	Oryzias latipes	89.87	3.00e-170	591.00
IUUC-Olu-087894	Ostreococcus lucimarinus	39.64	2.00e-65	243.00
IUUC-Oga-089036	Otolemur garnettii	97.32	0.00e+00	665.00
IUUC-Oar-089715	Ovis aries	97.35	0.00e+00	669.00
IUUC-Ptr-091000	Pan troglodytes	97.32	0.00e+00	664.00
IUUC-Pan-092187	Papio anubis	97.35	0.00e+00	670.00
IUUC-Psi-093377	Pelodiscus sinensis	94.40	5.00e-170	591.00
IUUC-Pma-094759	Petromyzon marinus	92.25	8.00e-80	290.00
IUUC-Pno-094883	Phaeosphaeria nodorum	31.55	1.00e-51	197.00
IUUC-Ppa-095684	Physcomitrella patens	42.38	1.00e-62	234.00
IUUC-Pfo-096861	Poecilia formosa	87.57	2.00e-172	598.00
IUUC-Pab-098030	Pongo abelii	97.35	0.00e+00	669.00
IUUC-Pop-099245	Populus trichocarpa	41.33	4.00e-73	268.00
IUUC-Pca-100191	Procavia capensis	93.88	0.00e+00	644.00
IUUC-Ppe-101829	Prunus persica	42.60	2.00e-72	266.00
IUUC-Pva-102689	Pteropus vampyrus	97.05	0.00e+00	670.00
IUUC-Pgr-103286	Puccinia graminis	36.03	3.00e-63	236.00
IUUC-Ptt-103919	Puccinia triticina	36.31	9.00e-64	237.00
IUUC-Pte-104372	Pyrenophora teres	32.50	2.00e-57	217.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	32.24	1.00e-55	211.00
IUUC-Rno-105723	Rattus norvegicus	97.32	0.00e+00	664.00
IUUC-Sce-106348	Saccharomyces cerevisiae	24.71	1.00e-17	84.30
IUUC-Sha-107300	Sarcophilus harrisii	93.68	6.00e-143	500.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	27.64	6.00e-36	145.00
IUUC-Spo-108308	Schizosaccharomyces pombe	29.81	5.00e-33	136.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	37.01	3.00e-23	103.00
IUUC-Smo-109123	Selaginella moellendorffii	44.03	3.00e-68	252.00
IUUC-Sit-110276	Setaria italica	42.09	7.00e-69	254.00
IUUC-Sly-111819	Solanum lycopersicum	43.14	2.00e-65	243.00
IUUC-Stu-112048	Solanum tuberosum	43.49	3.00e-69	255.00
IUUC-Sbi-114027	Sorghum bicolor	41.19	3.00e-71	262.00
IUUC-Sre-115212	Sporisorium reilianum	35.19	4.00e-53	202.00
IUUC-Ssc-116323	Sus scrofa	97.02	0.00e+00	661.00
IUUC-Tgu-117156	Taeniopygia guttata	94.81	1.00e-39	153.00
IUUC-Tru-118045	Takifugu rubripes	87.20	1.00e-172	599.00
IUUC-Tsy-118823	Tarsius syrichta	84.59	2.00e-152	531.00
IUUC-Tni-120106	Tetraodon nigroviridis	87.01	4.00e-119	421.00
IUUC-Tca-121462	Theobroma cacao	44.01	3.00e-72	265.00
IUUC-Tre-122204	Trichoderma reesei	38.67	5.00e-26	113.00
IUUC-Tvi-122550	Trichoderma virens	30.05	6.00e-44	172.00
IUUC-Tae-125239	Triticum aestivum	42.09	3.00e-69	256.00
IUUC-Tur-126538	Triticum urartu	37.26	1.00e-47	184.00
IUUC-Tme-127197	Tuber melanosporum	39.72	1.00e-59	224.00
IUUC-Tbe-127385	Tupaia belangeri	88.08	2.00e-172	598.00
IUUC-Ttr-128795	Tursiops truncatus	97.34	0.00e+00	669.00
IUUC-Uma-129401	Ustilago maydis	33.05	6.00e-48	186.00
IUUC-Vda-129968	Verticillium dahliae	28.57	7.00e-36	145.00
IUUC-Vvi-130944	Vitis vinifera	44.71	2.00e-72	266.00
IUUC-Xtr-131884	Xenopus tropicalis	91.39	2.00e-177	615.00
IUUC-Xma-133488	Xiphophorus maculatus	87.87	9.00e-174	603.00
IUUC-Yli-134552	Yarrowia lipolytica	23.66	5.00e-28	118.00
IUUC-Zma-135530	Zea mays	42.17	1.00e-64	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence