iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3191__AT4G12560.2	fgenesh2_kg.6__3191__AT4G12560.2	fgenesh2_kg.6__3191__AT4G12560.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	94.69	0.00e+00	675.00	IUUC-Ath-007525

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATIPMDIVN DIFLRLPAKT LVRCRTLSKP CYHLINDPDF IESHLHRVLQ SGDHLMILLR 60
GALRLYTVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG LSNSPTDLAV FNPSTRQIHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATGGCG ACGATTCCAA TGGATATCGT CAACGACATC TTCCTCCGAT TACCAGCAAA 60
AACCTTAGTT CGTTGTCGTA CTCTCTCAAA GCCATGCTAT CATCTAATCA ACGATCCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006527--F-box-assoc_dom_typ1
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF07734--FBA_1

SMART

SM00256--FBOX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0031348--P:negative regulation of defense response
GO:0042177--P:negative regulation of protein catabolic process

KEGG

aly:ARALYDRAFT_490057

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007525	Arabidopsis thaliana	94.69	0.00e+00	711.00
IUUC-Ani-009258	Aspergillus nidulans	35.48	9.40e-01	28.10
IUUC-Bdi-014637	Brachypodium distachyon	23.53	3.00e-18	85.90
IUUC-Bol-016596	Brassica oleracea	85.99	0.00e+00	671.00
IUUC-Bra-016667	Brassica rapa	83.01	0.00e+00	662.00
IUUC-Dor-030408	Dipodomys ordii	29.59	3.90e+00	26.90
IUUC-Gac-041513	Gasterosteus aculeatus	35.14	1.30e+00	28.50
IUUC-Gma-043754	Glycine max	36.06	8.00e-58	216.00
IUUC-Mpo-057331	Magnaporthe poae	30.00	1.40e-02	32.00
IUUC-Mtr-057739	Medicago truncatula	37.44	2.00e-62	232.00
IUUC-Mpu-065694	Mustela putorius furo	28.43	4.70e-02	32.30
IUUC-Oba-075275	Oryza barthii	25.90	1.00e-20	94.40
IUUC-Ogl-076999	Oryza glaberrima	25.90	9.00e-21	94.70
IUUC-Oin-079851	Oryza indica	27.41	1.00e-13	70.10
IUUC-Olo-080435	Oryza longistaminata	26.87	6.00e-21	94.70
IUUC-Oni-082603	Oryza nivara	26.30	2.00e-20	94.40
IUUC-Oru-084979	Oryza rufipogon	25.90	6.00e-21	94.70
IUUC-Osa-086023	Oryza sativa	25.90	4.00e-21	95.10
IUUC-Pop-099343	Populus trichocarpa	44.33	4.00e-76	278.00
IUUC-Ppe-102037	Prunus persica	37.47	6.00e-71	260.00
IUUC-Sit-110556	Setaria italica	23.10	8.00e-10	58.90
IUUC-Sly-111548	Solanum lycopersicum	35.55	8.00e-49	186.00
IUUC-Stu-112748	Solanum tuberosum	32.19	2.00e-54	206.00
IUUC-Sbi-114741	Sorghum bicolor	26.37	8.00e-16	78.60
IUUC-Tru-118708	Takifugu rubripes	24.64	7.90e-01	28.90
IUUC-Tca-121319	Theobroma cacao	50.36	1.00e-103	369.00
IUUC-Tae-123165	Triticum aestivum	25.16	8.00e-15	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence