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Tag Content
iUUCD ID IUUC-Aly-006055
Ensembl Protein ID fgenesh2_kg.4__2684__AT2G44950.1
UniProt Accession D7LBU2; D7LBU2_ARALL
Genbank Protein ID EFH58250.1
Protein Name Histone mono-ubiquitination 1
Genbank Nucleotide ID GL348716
Gene Name RDO4; HUB1; ARALYDRAFT_483624
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.4__2684__AT2G44950.1 fgenesh2_kg.4__2684__AT2G44950.1 fgenesh2_kg.4__2684__AT2G44950.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 96.92 0.00e+00 1659.00 IUUC-Ath-007462
E3 activity/RING/RING 27.27 1.00e-17 89.00 IUUC-Cel-018659
E3 activity/RING/RING 26.40 3.00e-28 124.00 IUUC-Dme-032034
E3 activity/RING/RING 28.16 1.00e-28 125.00 IUUC-Rno-105165
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MASTGEPDRK RRHFSSISPS EAAAAVKKQP FFWPSSEDKL DTAVLQFQNL QLSQKLEAQQ 60
VECSILEDKL SQIKEKQLPY SSSLKTVHKS WEKLTATVES CSVRVSDSSS GAHRFVNKED 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006055|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCACTCTTGT TTTTGTTTCT GTGAGTGCTG TGTGTTGGCG AGAGAGTGCT TTGGGTGTTT 60
GTTATATCTT TAGTCGCACA AAGATCAGAC AAGACTAGAG TTTGGTCGAA TTTGGAAGAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006055|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0005739--C:mitochondrion
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051301--P:cell division
GO:0016049--P:cell growth
GO:0009817--P:defense response to fungus, incompatible interaction
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0009965--P:leaf morphogenesis
GO:0010389--P:regulation of G2/M transition of mitotic cell cycle
GO:0010162--P:seed dormancy process
GO:0010228--P:vegetative to reproductive phase transition of meristem
KEGG aly:ARALYDRAFT_483624
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000994 Aegilops tauschii 34.89 4.00e-122 432.00
IUUC-Aml-002295 Ailuropoda melanoleuca 29.49 1.00e-31 130.00
IUUC-Atr-002836 Amborella trichopoda 47.48 0.00e+00 719.00
IUUC-Apl-003407 Anas platyrhynchos 28.42 4.00e-26 113.00
IUUC-Aca-004850 Anolis carolinensis 28.61 4.00e-28 119.00
IUUC-Ath-007462 Arabidopsis thaliana 96.92 0.00e+00 1658.00
IUUC-Ani-009488 Aspergillus nidulans 41.18 5.00e-07 48.50
IUUC-Ame-011745 Astyanax mexicanus 27.99 2.00e-29 124.00
IUUC-Bgr-012245 Blumeria graminis 39.62 2.00e-09 57.00
IUUC-Bta-013173 Bos taurus 29.28 3.00e-31 129.00
IUUC-Bdi-014799 Brachypodium distachyon 43.63 4.00e-176 611.00
IUUC-Bol-015421 Brassica oleracea 87.24 0.00e+00 1444.00
IUUC-Bra-016664 Brassica rapa 87.37 0.00e+00 1436.00
IUUC-Cel-018659 Caenorhabditis elegans 27.27 3.00e-25 109.00
IUUC-Cja-019042 Callithrix jacchus 29.76 2.00e-30 127.00
IUUC-Cfa-020318 Canis familiaris 29.49 1.00e-31 131.00
IUUC-Cpo-021539 Cavia porcellus 29.83 4.00e-31 129.00
IUUC-Csa-024051 Chlorocebus sabaeus 29.76 8.00e-32 132.00
IUUC-Cho-024616 Choloepus hoffmanni 38.78 3.00e-18 86.70
IUUC-Cin-025174 Ciona intestinalis 29.09 2.00e-28 120.00
IUUC-Csv-025830 Ciona savignyi 29.07 8.00e-24 105.00
IUUC-Dre-028171 Danio rerio 29.41 5.00e-28 119.00
IUUC-Dno-028892 Dasypus novemcinctus 29.49 1.00e-31 131.00
IUUC-Dor-030268 Dipodomys ordii 29.46 2.00e-31 130.00
IUUC-Dse-031300 Dothistroma septosporum 29.23 3.00e-12 66.60
IUUC-Dme-032034 Drosophila melanogaster 25.20 7.00e-29 122.00
IUUC-Ete-032505 Echinops telfairi 30.72 3.00e-09 57.00
IUUC-Eca-033436 Equus caballus 29.49 3.00e-31 130.00
IUUC-Eeu-034801 Erinaceus europaeus 42.70 1.00e-17 84.70
IUUC-Fca-035720 Felis catus 29.22 1.00e-31 131.00
IUUC-Fal-037622 Ficedula albicollis 41.28 6.00e-19 89.40
IUUC-Fox-038017 Fusarium oxysporum 32.65 3.00e-10 60.10
IUUC-Fso-038414 Fusarium solani 37.50 1.00e-09 57.80
IUUC-Gmo-039269 Gadus morhua 27.86 9.00e-31 128.00
IUUC-Gga-040412 Gallus gallus 28.68 1.00e-26 114.00
IUUC-Gac-041303 Gasterosteus aculeatus 28.02 4.00e-30 126.00
IUUC-Gma-043027 Glycine max 50.62 0.00e+00 839.00
IUUC-Ggo-045426 Gorilla gorilla 28.89 7.00e-32 132.00
IUUC-Hsa-045732 Homo sapiens 28.89 9.00e-32 131.00
IUUC-Hvu-047689 Hordeum vulgare 42.86 0.00e+00 628.00
IUUC-Itr-048724 Ictidomys tridecemlineatus 29.49 1.00e-31 131.00
IUUC-Kpa-049345 Komagataella pastoris 32.26 2.00e-09 57.00
IUUC-Lch-049429 Latimeria chalumnae 29.44 1.00e-30 127.00
IUUC-Lpe-051253 Leersia perrieri 40.58 9.00e-165 573.00
IUUC-Loc-052847 Lepisosteus oculatus 34.56 2.00e-21 95.90
IUUC-Laf-054267 Loxodonta africana 29.49 2.00e-31 130.00
IUUC-Mcc-055240 Macaca mulatta 29.76 7.00e-32 132.00
IUUC-Meu-056750 Macropus eugenii 29.32 2.00e-31 130.00
IUUC-Mtr-057632 Medicago truncatula 50.74 0.00e+00 838.00
IUUC-Mla-059072 Melampsora laricipopulina 43.48 9.00e-16 78.60
IUUC-Mga-059731 Meleagris gallopavo 28.68 2.00e-26 114.00
IUUC-Mvi-060341 Microbotryum violaceum 34.48 7.00e-17 82.00
IUUC-Mmr-061177 Microcebus murinus 29.76 1.00e-31 131.00
IUUC-Mdo-062415 Monodelphis domestica 28.61 4.00e-32 133.00
IUUC-Mmu-063981 Mus musculus 29.49 2.00e-31 130.00
IUUC-Mac-065103 Musa acuminata 44.87 0.00e+00 706.00
IUUC-Mpu-066498 Mustela putorius furo 29.22 1.00e-31 131.00
IUUC-Mlu-067242 Myotis lucifugus 29.49 1.00e-31 131.00
IUUC-Nle-069320 Nomascus leucogenys 31.33 5.00e-09 56.20
IUUC-Opr-071149 Ochotona princeps 38.78 2.00e-18 87.40
IUUC-Ont-071299 Oreochromis niloticus 28.02 3.00e-30 126.00
IUUC-Oan-072996 Ornithorhynchus anatinus 27.91 1.00e-26 114.00
IUUC-Ocu-073799 Oryctolagus cuniculus 29.49 1.00e-31 131.00
IUUC-Oba-075000 Oryza barthii 40.15 1.00e-167 582.00
IUUC-Obr-076532 Oryza brachyantha 42.94 5.00e-180 624.00
IUUC-Ogl-077200 Oryza glaberrima 42.06 2.00e-180 625.00
IUUC-Ogu-078279 Oryza glumaepatula 44.13 3.00e-142 498.00
IUUC-Oin-079097 Oryza indica 42.06 3.00e-180 624.00
IUUC-Olo-080447 Oryza longistaminata 37.89 6.00e-139 487.00
IUUC-Ome-081304 Oryza meridionalis 42.48 7.00e-179 620.00
IUUC-Oni-082162 Oryza nivara 38.64 1.00e-157 550.00
IUUC-Opu-083812 Oryza punctata 39.63 9.00e-147 513.00
IUUC-Oru-084382 Oryza rufipogon 38.53 1.00e-157 549.00
IUUC-Ola-086435 Oryzias latipes 28.02 3.00e-30 126.00
IUUC-Olu-087683 Ostreococcus lucimarinus 37.50 2.00e-15 73.90
IUUC-Oga-089016 Otolemur garnettii 29.76 1.00e-31 131.00
IUUC-Oar-089589 Ovis aries 28.95 4.00e-31 129.00
IUUC-Ptr-090530 Pan troglodytes 50.00 6.00e-16 79.30
IUUC-Pan-092502 Papio anubis 29.76 7.00e-32 132.00
IUUC-Psi-093554 Pelodiscus sinensis 40.00 3.00e-18 87.00
IUUC-Pfo-097527 Poecilia formosa 27.37 1.00e-25 111.00
IUUC-Pab-098619 Pongo abelii 29.76 1.00e-31 131.00
IUUC-Pop-099376 Populus trichocarpa 56.75 0.00e+00 923.00
IUUC-Pca-100544 Procavia capensis 29.49 2.00e-31 130.00
IUUC-Ppe-102065 Prunus persica 56.19 0.00e+00 883.00
IUUC-Pva-102479 Pteropus vampyrus 28.95 3.00e-31 130.00
IUUC-Pgr-103536 Puccinia graminis 40.86 2.00e-17 84.00
IUUC-Rno-105165 Rattus norvegicus 29.22 1.00e-31 131.00
IUUC-Sha-107602 Sarcophilus harrisii 28.61 4.00e-32 133.00
IUUC-Sit-109889 Setaria italica 41.54 8.00e-178 616.00
IUUC-Sly-111490 Solanum lycopersicum 51.43 0.00e+00 780.00
IUUC-Sar-113349 Sorex araneus 38.78 3.00e-18 87.00
IUUC-Sbi-114734 Sorghum bicolor 44.83 9.00e-59 219.00
IUUC-Sre-115087 Sporisorium reilianum 32.04 2.00e-15 77.40
IUUC-Ssc-116134 Sus scrofa 29.74 4.00e-30 126.00
IUUC-Tgu-116549 Taeniopygia guttata 41.28 4.00e-19 89.70
IUUC-Tru-117867 Takifugu rubripes 28.02 5.00e-30 125.00
IUUC-Tsy-119065 Tarsius syrichta 25.63 5.00e-06 46.20
IUUC-Tni-120802 Tetraodon nigroviridis 28.02 4.00e-30 126.00
IUUC-Tca-121060 Theobroma cacao 59.43 0.00e+00 986.00
IUUC-Tae-125456 Triticum aestivum 43.00 3.00e-173 601.00
IUUC-Tur-126786 Triticum urartu 38.08 8.00e-148 517.00
IUUC-Tbe-127597 Tupaia belangeri 30.71 1.00e-27 117.00
IUUC-Ttr-128303 Tursiops truncatus 28.91 1.00e-30 127.00
IUUC-Uma-129488 Ustilago maydis 41.07 4.00e-15 76.30
IUUC-Vpa-130237 Vicugna pacos 40.00 2.00e-18 87.00
IUUC-Vvi-131316 Vitis vinifera 56.46 0.00e+00 919.00
IUUC-Xtr-132906 Xenopus tropicalis 26.72 1.00e-29 125.00
IUUC-Xma-133607 Xiphophorus maculatus 27.98 2.00e-29 123.00
Created Date 25-Jun-2017

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