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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Cel-018646
UUCD1 version UUC-CaE-00726
Ensembl Protein ID Y106G6H.12a
UniProt Accession U4PBM0; U4PBM0_CAEEL
Genbank Protein ID CDH93264.1
Protein Name Deubiquitylating with USP/UBP and OTU domains
Genbank Nucleotide ID BX284601
Gene Name duo-3; CELE_Y106G6H.12; Y106G6H.12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00001112 Y106G6H.12a Y106G6H.12a
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 7.40e-38 130.9 304 924
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 3    lkNlgNtCYmNSvLQcLsnipelrellle......kkkeklneenp.......kepkgellkslqklfeelw.........kskkkavsprellka.. 76
    l N gN+CY+NS++Q+Ls++p+l + + n+ pk ++ +s+ +++ +l +++ ++s +el ++
   Q: 304 LYNTGNSCYFNSTMQALSSCPSLVSRFEMlhrlrhG--------NYlecpsydLRPKFAVFESCLRMMVKLSdrmenphlkEYRLPSFSETELANTrl 393
    67***********************99995555443........333333333677777777777777777433333333444444777777776533 PP
   S: 77 .lkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldls 173
    ++++ +ef++++q+Da+E+l+ ll+ +++ + + ++ k+ ++++ + +++ + +c +c+++ ++ + + l+
   Q: 394 kIGRVVKEFDNNDQKDAHEYLTELLSCVDDIM----------------------QVVPDEIKHLDPLNS-IRYKTERSFICFNCGHEEKSSDCGWILP 468
    38899999**********************99......................234445555666655.5889999********************* PP
   S: 174 lpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.... 267
    l++++++ + ++Les +k+ le + c++c +a+ + ++ ++Pe+Lil+ +R++ ++ + +k n+++++pl+Ldl++f +
   Q: 469 LSISNNDYG----IIELLESNFKTT-LET--NKICSSCSC-ENAVSSERIANFPECLILNPMRYERTSI-SDYRKDNRQITVPLTLDLTRFGAFasle 557
    *******85....777776555543.332..246777764.45888999***************77665.5667***************988776677 PP
   S: 268 .................................................................................................. 267
   
   Q: 558 qdenrnsvsfgscgkdsikyrngpsigprllslnggslddeeidiemmkevvknplhfkwltdldeieqmlkltnityrrddvkihvekleneksvvm 655
    77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP
   S: 268 .................................................................................................. 267
   
   Q: 656 kkfdrpgrvkgiesdgncfyraiswcltgsqkyhkalriatanylrndiaivdkychktdhktyvqqvegdgwwatnveicvmanllnvniytflsdg 753
    77777777777777777777777777777777777777777777777776666666666666666666666666666666666666666666666666 PP
   S: 268 ................................................peekqke........................................... 274
    +
   Q: 754 wictspqnsstsrsgsfylenkdchyepvlslkkddslrsrkrrntdtE-----Ytddnegggfkkrkpdddasrkprnlseserrrqpprdaedngn 846
    6666666666666666666666666665555555555555555555550.....05555555555555555555566666666666666666666666 PP
   S: 275 ...........kkkYeLiavvvHsG.slssGHYvayvkn..ekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
    kY+L+a ++H G ++ GHY a+ ++ + kWl ++D V+ ++ +v ++ +s++Y+lfY r+
   Q: 847 hykkmnantdqIAKYRLFAAICHIGeFPDRGHYLALTRDlyNPSKWLDCSDAVVRDISSGDVIKDASSSGYLLFYDRQ 924
    677777777779*************99************666667******************************985 PP
   

Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MLENFFIDVT ITRPRITPIR MLKRQIEFTS DSIRFRCPGG GDKEYYYTQM MYKPIADNSH 60
TGAKLLNIEL NKQCEESYIK LEFTSHDAHR HMGWVVNQFN KMIEANKDVM EHPKKRNLAT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cel-018646|DUB,USP|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCTGGAAA ACTTCTTTAT TGACGTGACC ATCACAAGAC CTCGCATCAC ACCTATAAGA 60
ATGTTGAAGA GACAAATCGA ATTCACATCG GATTCTATCA GATTCAGGTG TCCCGGAGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cel-018646|DUB,USP|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR003323--OTU_dom
IPR001394--Peptidase_C19_UCH
IPR028889--USP_dom

PROSITE

PS50802--OTU
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG cel:CELE_Y106G6H.12
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Mla-058976 Melampsora laricipopulina 29.17 2.00e-07 47.80
Created Date 25-Jun-2017

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