iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099335

Ensembl Protein ID

POPTR_0002s19070.1

UniProt Accession

A9P863; A9P863_POPTR

Genbank Protein ID

ABK92566.1; ABK93901.1; ABK94236.1; ABK94239.1; ABK94284.1; EEE80812.1; EEE82557.1; ERP54754.1

Protein Name

Ubiquitin/ribosomal fusion family protein; Ubiquitin/ribosomal protein 27a

Genbank Nucleotide ID

EF144310; EF145772; EF146141; EF146144; EF146193; CM000338; CM000337; CM000348

Gene Name

POPTRDRAFT_547834; POPTR_0001s06260g; POPTR_0002s19070g; POPTR_0012s11550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s19070	POPTR_0002s19070.1	POPTR_0002s19070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.70e-41	140.8	1	76
ULD/UDP/UBQ/UBQ_PIM	1.10e-27	96.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKKKKVKL AVLQFYKVDD SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCACCGGC CGAAACAATC TCTTCCCATT CTGCTTTGCA TCTACAAGCG AAGATGCAGA 60
TCTTCGTGAA AACCTTGACG GGTAAGACAA TAACCCTCGA GGTTGAGTCC TCAGACACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

pop:POPTR_0001s06260g; pop:POPTR_0002s19070g; pop:POPTR_0012s11550g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001873	Ailuropoda melanoleuca	84.97	4.00e-57	213.00
IUUC-Apl-003364	Anas platyrhynchos	75.16	1.00e-49	187.00
IUUC-Aca-005055	Anolis carolinensis	84.31	6.00e-63	232.00
IUUC-Aly-005568	Arabidopsis lyrata	96.15	2.00e-71	259.00
IUUC-Ath-006984	Arabidopsis thaliana	96.13	2.00e-70	256.00
IUUC-Ago-007733	Ashbya gossypii	81.88	2.00e-50	190.00
IUUC-Afu-009021	Aspergillus fumigatus	83.01	6.00e-60	222.00
IUUC-Ame-011421	Astyanax mexicanus	84.97	7.00e-57	212.00
IUUC-Bta-012585	Bos taurus	84.97	4.00e-57	213.00
IUUC-Bdi-014571	Brachypodium distachyon	96.13	1.00e-62	231.00
IUUC-Bol-015420	Brassica oleracea	96.15	4.00e-71	259.00
IUUC-Cja-019661	Callithrix jacchus	84.31	1.00e-52	197.00
IUUC-Cfa-020795	Canis familiaris	84.97	4.00e-57	213.00
IUUC-Cpo-021905	Cavia porcellus	83.87	9.00e-56	208.00
IUUC-Csa-023120	Chlorocebus sabaeus	84.97	4.00e-57	213.00
IUUC-Cin-025785	Ciona intestinalis	85.43	5.00e-57	212.00
IUUC-Cgl-026423	Colletotrichum gloeosporioides	76.97	3.00e-49	187.00
IUUC-Dre-028206	Danio rerio	84.97	7.00e-57	212.00
IUUC-Dno-029073	Dasypus novemcinctus	84.97	3.00e-57	213.00
IUUC-Dse-031483	Dothistroma septosporum	82.78	5.00e-57	212.00
IUUC-Dme-032068	Drosophila melanogaster	83.66	4.00e-51	192.00
IUUC-Ete-032297	Echinops telfairi	58.82	7.00e-47	178.00
IUUC-Eca-034346	Equus caballus	85.53	2.00e-57	213.00
IUUC-Fca-035555	Felis catus	84.97	4.00e-57	213.00
IUUC-Fal-037049	Ficedula albicollis	84.97	2.00e-57	213.00
IUUC-Fox-037994	Fusarium oxysporum	83.01	3.00e-58	216.00
IUUC-Fso-038121	Fusarium solani	83.55	1.00e-59	221.00
IUUC-Gmo-039231	Gadus morhua	84.97	8.00e-57	212.00
IUUC-Ggr-039996	Gaeumannomyces graminis	83.55	1.00e-53	201.00
IUUC-Gga-040938	Gallus gallus	84.97	2.00e-57	213.00
IUUC-Gac-041956	Gasterosteus aculeatus	84.97	6.00e-57	212.00
IUUC-Gma-043007	Glycine max	98.69	4.00e-72	262.00
IUUC-Ggo-044980	Gorilla gorilla	84.97	4.00e-57	213.00
IUUC-Hsa-046329	Homo sapiens	84.97	4.00e-57	213.00
IUUC-Itr-047994	Ictidomys tridecemlineatus	84.97	4.00e-57	213.00
IUUC-Lch-050032	Latimeria chalumnae	84.97	2.00e-57	213.00
IUUC-Loc-052020	Lepisosteus oculatus	84.97	9.00e-57	211.00
IUUC-Laf-054502	Loxodonta africana	80.85	1.00e-46	177.00
IUUC-Mcc-055895	Macaca mulatta	84.97	4.00e-57	213.00
IUUC-Meu-056529	Macropus eugenii	84.97	4.00e-57	213.00
IUUC-Mor-056959	Magnaporthe oryzae	83.55	1.00e-53	201.00
IUUC-Mpo-057436	Magnaporthe poae	83.55	1.00e-53	201.00
IUUC-Mtr-058225	Medicago truncatula	98.69	2.00e-72	263.00
IUUC-Mla-058871	Melampsora laricipopulina	85.33	5.00e-61	226.00
IUUC-Mga-059211	Meleagris gallopavo	79.72	1.00e-48	184.00
IUUC-Mmr-060710	Microcebus murinus	84.31	1.00e-62	231.00
IUUC-Mdo-062150	Monodelphis domestica	83.87	3.00e-56	210.00
IUUC-Mmu-064336	Mus musculus	84.31	1.00e-56	211.00
IUUC-Mac-064616	Musa acuminata	96.82	1.00e-70	257.00
IUUC-Mpu-066613	Mustela putorius furo	84.97	4.00e-57	213.00
IUUC-Mlu-067676	Myotis lucifugus	84.97	4.00e-57	213.00
IUUC-Nfi-068350	Neosartorya fischeri	83.01	6.00e-60	222.00
IUUC-Ncr-068635	Neurospora crassa	82.47	2.00e-54	203.00
IUUC-Nle-069607	Nomascus leucogenys	81.70	2.00e-54	203.00
IUUC-Opr-070523	Ochotona princeps	83.55	4.00e-54	202.00
IUUC-Ont-071636	Oreochromis niloticus	84.97	8.00e-57	211.00
IUUC-Oan-073638	Ornithorhynchus anatinus	84.97	2.00e-57	214.00
IUUC-Ocu-074497	Oryctolagus cuniculus	84.97	4.00e-57	213.00
IUUC-Ola-086383	Oryzias latipes	84.97	5.00e-57	212.00
IUUC-Olu-087619	Ostreococcus lucimarinus	85.14	2.00e-47	181.00
IUUC-Oga-089160	Otolemur garnettii	73.20	2.00e-54	203.00
IUUC-Oar-090107	Ovis aries	85.53	4.00e-57	213.00
IUUC-Ptr-090854	Pan troglodytes	84.97	3.00e-57	213.00
IUUC-Pan-092065	Papio anubis	84.97	4.00e-57	213.00
IUUC-Psi-093901	Pelodiscus sinensis	83.21	3.00e-48	182.00
IUUC-Pma-094647	Petromyzon marinus	81.51	8.00e-37	144.00
IUUC-Ppa-095330	Physcomitrella patens	96.79	4.00e-72	262.00
IUUC-Pfo-097442	Poecilia formosa	84.97	7.00e-57	212.00
IUUC-Pab-098246	Pongo abelii	74.51	3.00e-54	203.00
IUUC-Ppe-101784	Prunus persica	100.00	3.00e-74	269.00
IUUC-Pva-102665	Pteropus vampyrus	87.07	1.00e-55	207.00
IUUC-Pte-104221	Pyrenophora teres	83.66	4.00e-60	223.00
IUUC-Pyt-104464	Pyrenophora triticirepentis	82.35	5.00e-59	219.00
IUUC-Rno-105805	Rattus norvegicus	84.31	1.00e-56	211.00
IUUC-Sce-106232	Saccharomyces cerevisiae	84.46	1.00e-51	194.00
IUUC-Sha-106772	Sarcophilus harrisii	84.97	4.00e-57	213.00
IUUC-Sja-107726	Schizosaccharomyces japonicus	86.39	2.00e-57	213.00
IUUC-Sit-110462	Setaria italica	96.13	2.00e-68	250.00
IUUC-Sly-111035	Solanum lycopersicum	100.00	2.00e-74	271.00
IUUC-Stu-112470	Solanum tuberosum	100.00	3.00e-74	269.00
IUUC-Ssc-115514	Sus scrofa	84.97	4.00e-57	213.00
IUUC-Tgu-116890	Taeniopygia guttata	84.42	4.00e-56	209.00
IUUC-Tru-118475	Takifugu rubripes	84.97	9.00e-57	211.00
IUUC-Tsy-119447	Tarsius syrichta	84.97	3.00e-57	213.00
IUUC-Tni-119751	Tetraodon nigroviridis	81.75	1.00e-46	177.00
IUUC-Tca-121126	Theobroma cacao	100.00	3.00e-74	269.00
IUUC-Tre-122027	Trichoderma reesei	82.24	1.00e-58	217.00
IUUC-Tvi-122659	Trichoderma virens	82.24	1.00e-58	217.00
IUUC-Tae-124683	Triticum aestivum	96.13	1.00e-62	231.00
IUUC-Ttr-128453	Tursiops truncatus	84.97	4.00e-57	213.00
IUUC-Vda-129762	Verticillium dahliae	84.00	1.00e-53	201.00
IUUC-Vpa-130119	Vicugna pacos	67.11	4.00e-36	142.00
IUUC-Vvi-131376	Vitis vinifera	99.36	4.00e-74	269.00
IUUC-Xtr-131977	Xenopus tropicalis	76.47	5.00e-49	185.00
IUUC-Yli-134406	Yarrowia lipolytica	84.35	3.00e-45	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence