iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114759

UUCD1 version

UUC-SoB-00044

Ensembl Protein ID

Sb03g032270.1

UniProt Accession

A0A1B6Q5L1; A0A1B6Q5L1_SORBI

Genbank Protein ID

KXG33205.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G270400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g032270	Sb03g032270.1	Sb03g032270.1
Sb03g032270	Sb03g032270.2	Sb03g032270.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.5	278	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +  k++++ l C H+fh++C+ +w       +   +CPlC+
   Q: 278  CCICLAQYreKEEVRQLACTHMFHLKCVDRW------LRIISSCPLCK 319
           ******9988667******************......99999*****7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRPPSSSSSS SSSSSSSSSA MAAPGGGRMS AFTMRAVARM SRARWFIFLR RVYQYQNGPR 60
SDLGSNPFNS PGWLALELGV IVAQMVLTTA VVATSSAERP AWPLRLWVAA YNVGNVLSLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAATGC GCCCCTCCGG CGTCGCACCA CAGCAATGCG GCCGCCTTCC TCCTCCTCCT 60
CCTCCTCCTC TTCCTCTTCT TCTTCGTCGT CGGCGATGGC GGCGCCTGGA GGCGGCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000590	Aegilops tauschii	88.34	4.00e-133	466.00
IUUC-Bdi-014673	Brachypodium distachyon	88.32	1.00e-139	488.00
IUUC-Bol-015486	Brassica oleracea	54.43	2.00e-89	321.00
IUUC-Bra-017291	Brassica rapa	55.63	4.00e-89	320.00
IUUC-Gma-043271	Glycine max	56.33	2.00e-86	311.00
IUUC-Lpe-051355	Leersia perrieri	88.55	1.00e-127	448.00
IUUC-Mla-059067	Melampsora laricipopulina	53.33	1.00e-10	60.80
IUUC-Mac-065295	Musa acuminata	63.51	5.00e-83	300.00
IUUC-Oba-075888	Oryza barthii	90.03	1.00e-135	474.00
IUUC-Obr-076365	Oryza brachyantha	90.17	2.00e-136	477.00
IUUC-Ogl-077396	Oryza glaberrima	83.81	3.00e-134	470.00
IUUC-Ogu-078273	Oryza glumaepatula	90.03	1.00e-135	474.00
IUUC-Oin-079923	Oryza indica	89.40	9.00e-135	471.00
IUUC-Olo-080790	Oryza longistaminata	90.03	4.00e-145	506.00
IUUC-Oni-083024	Oryza nivara	90.03	1.00e-135	474.00
IUUC-Opu-083493	Oryza punctata	90.73	6.00e-141	492.00
IUUC-Oru-084870	Oryza rufipogon	90.03	1.00e-135	474.00
IUUC-Osa-086097	Oryza sativa	90.03	1.00e-135	474.00
IUUC-Pop-099848	Populus trichocarpa	56.33	4.00e-91	327.00
IUUC-Ppe-101467	Prunus persica	55.85	8.00e-91	326.00
IUUC-Sit-110094	Setaria italica	92.18	1.00e-151	528.00
IUUC-Tae-123082	Triticum aestivum	89.26	3.00e-142	496.00
IUUC-Vvi-131737	Vitis vinifera	59.00	7.00e-94	336.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence