iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000017817.2	ENSLACT00000025757.1	ENSLACP00000022470.1
ENSLACG00000017817.2	ENSLACT00000020411.1	ENSLACP00000020271.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UFD/PB1	31.60	4.00e-21	97.80	IUUC-Sce-106197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

AQLSSADVGI QLISDGSVVY AEALWDHVTM DDQELGFKAG DVIEVVDATN KEWWWGRILD 60
SEGWFPASFV RLWVNQDEPT DDYITKIEDG KPEAASGATR RHGAGQTNKD QMRTNVINEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTGAAT CTACAGGGAA AGAAGAAAAA AATAGTTCAC GTTTAAAAAA GAAAAAAAAA 60
AGTGGTGAGG GTGGAGGGCA CAGGATTGAG CCGGGCCTGG TTTTATCTGC TGATATGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0344--Guanine-nucleotide releasing factor
KW-1185--Reference proteome

Interpro

IPR000219--DH-domain
IPR001331--GDS_CDC24_CS
IPR011993--PH_dom-like
IPR001849--PH_domain
IPR001452--SH3_domain

PROSITE

PS00741--DH_1
PS50010--DH_2
PS50003--PH_DOMAIN
PS50002--SH3

Pfam

PF00169--PH
PF00621--RhoGEF
PF00018--SH3_1

SMART

SM00233--PH
SM00325--RhoGEF
SM00326--SH3

Gene Ontology

GO:0005622--C:intracellular
GO:0005089--F:Rho guanyl-nucleotide exchange factor activity
GO:0035556--P:intracellular signal transduction
GO:0035023--P:regulation of Rho protein signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002073	Ailuropoda melanoleuca	62.86	0.00e+00	681.00
IUUC-Apl-004117	Anas platyrhynchos	64.43	0.00e+00	712.00
IUUC-Aca-004793	Anolis carolinensis	63.59	0.00e+00	688.00
IUUC-Ame-010682	Astyanax mexicanus	52.90	2.00e-167	583.00
IUUC-Bta-013253	Bos taurus	68.78	0.00e+00	784.00
IUUC-Cja-019555	Callithrix jacchus	63.22	0.00e+00	675.00
IUUC-Cfa-020578	Canis familiaris	63.04	0.00e+00	685.00
IUUC-Cpo-021726	Cavia porcellus	34.10	8.00e-22	99.80
IUUC-Csa-023331	Chlorocebus sabaeus	69.15	0.00e+00	794.00
IUUC-Cho-025069	Choloepus hoffmanni	36.92	1.00e-55	212.00
IUUC-Cin-025453	Ciona intestinalis	52.56	2.00e-126	445.00
IUUC-Csv-025922	Ciona savignyi	49.35	1.00e-98	354.00
IUUC-Cne-027023	Cryptococcus neoformans	25.17	5.00e-14	73.60
IUUC-Dre-028197	Danio rerio	75.14	0.00e+00	824.00
IUUC-Dno-029679	Dasypus novemcinctus	63.41	0.00e+00	661.00
IUUC-Dor-030739	Dipodomys ordii	68.42	0.00e+00	793.00
IUUC-Dme-031672	Drosophila melanogaster	27.85	4.00e-22	100.00
IUUC-Ete-032545	Echinops telfairi	39.45	9.00e-47	182.00
IUUC-Eca-034299	Equus caballus	62.68	0.00e+00	666.00
IUUC-Eeu-034720	Erinaceus europaeus	36.26	8.00e-57	216.00
IUUC-Fca-036416	Felis catus	67.60	0.00e+00	627.00
IUUC-Fal-037035	Ficedula albicollis	63.16	0.00e+00	702.00
IUUC-Gmo-039587	Gadus morhua	75.22	0.00e+00	852.00
IUUC-Gga-040841	Gallus gallus	75.86	0.00e+00	870.00
IUUC-Gac-042498	Gasterosteus aculeatus	75.77	0.00e+00	857.00
IUUC-Ggo-044700	Gorilla gorilla	36.64	4.00e-58	220.00
IUUC-Hsa-045681	Homo sapiens	69.40	0.00e+00	658.00
IUUC-Itr-048380	Ictidomys tridecemlineatus	62.86	0.00e+00	672.00
IUUC-Loc-051994	Lepisosteus oculatus	77.86	0.00e+00	868.00
IUUC-Laf-054307	Loxodonta africana	63.65	0.00e+00	705.00
IUUC-Mcc-055305	Macaca mulatta	70.21	3.00e-139	488.00
IUUC-Meu-056376	Macropus eugenii	72.86	0.00e+00	726.00
IUUC-Mor-057139	Magnaporthe oryzae	26.17	1.00e-10	62.40
IUUC-Mla-059044	Melampsora laricipopulina	24.23	1.00e-19	92.00
IUUC-Mga-059644	Meleagris gallopavo	63.22	0.00e+00	693.00
IUUC-Mvi-060486	Microbotryum violaceum	26.47	6.00e-24	106.00
IUUC-Mmr-061664	Microcebus murinus	70.02	0.00e+00	629.00
IUUC-Mdo-062404	Monodelphis domestica	36.63	4.00e-57	217.00
IUUC-Mmu-063143	Mus musculus	36.63	8.00e-57	216.00
IUUC-Mpu-066851	Mustela putorius furo	63.41	0.00e+00	643.00
IUUC-Mlu-066956	Myotis lucifugus	62.68	0.00e+00	655.00
IUUC-Nle-069174	Nomascus leucogenys	37.50	8.00e-43	167.00
IUUC-Opr-070209	Ochotona princeps	63.04	0.00e+00	665.00
IUUC-Ont-072637	Oreochromis niloticus	75.59	0.00e+00	857.00
IUUC-Oan-073722	Ornithorhynchus anatinus	59.82	0.00e+00	649.00
IUUC-Ocu-074885	Oryctolagus cuniculus	69.72	0.00e+00	641.00
IUUC-Ola-087155	Oryzias latipes	34.88	3.00e-53	204.00
IUUC-Oga-088758	Otolemur garnettii	63.22	0.00e+00	679.00
IUUC-Oar-089923	Ovis aries	68.78	0.00e+00	789.00
IUUC-Ptr-091555	Pan troglodytes	62.50	0.00e+00	689.00
IUUC-Pan-092037	Papio anubis	63.41	0.00e+00	703.00
IUUC-Psi-093865	Pelodiscus sinensis	64.38	0.00e+00	717.00
IUUC-Pfo-096918	Poecilia formosa	34.84	6.00e-54	206.00
IUUC-Pab-097910	Pongo abelii	62.98	0.00e+00	699.00
IUUC-Pca-100891	Procavia capensis	38.22	1.00e-54	209.00
IUUC-Pva-102967	Pteropus vampyrus	69.58	4.00e-145	508.00
IUUC-Pgr-103400	Puccinia graminis	26.37	3.00e-22	100.00
IUUC-Rno-105479	Rattus norvegicus	35.31	1.00e-56	215.00
IUUC-Sce-106197	Saccharomyces cerevisiae	31.60	2.00e-21	97.80
IUUC-Sha-107592	Sarcophilus harrisii	61.78	0.00e+00	677.00
IUUC-Sja-107728	Schizosaccharomyces japonicus	23.97	2.00e-09	58.20
IUUC-Spo-108284	Schizosaccharomyces pombe	28.08	1.00e-17	85.10
IUUC-Sar-113369	Sorex araneus	67.65	1.00e-125	442.00
IUUC-Sre-115126	Sporisorium reilianum	27.27	4.00e-24	107.00
IUUC-Tgu-117088	Taeniopygia guttata	76.23	0.00e+00	861.00
IUUC-Tru-118716	Takifugu rubripes	35.47	6.00e-55	209.00
IUUC-Tsy-118846	Tarsius syrichta	64.86	1.00e-134	472.00
IUUC-Tni-120887	Tetraodon nigroviridis	35.55	8.00e-54	206.00
IUUC-Tme-127216	Tuber melanosporum	25.17	4.00e-22	100.00
IUUC-Tbe-127248	Tupaia belangeri	37.90	6.00e-54	206.00
IUUC-Ttr-128429	Tursiops truncatus	33.20	2.00e-22	101.00
IUUC-Uma-129594	Ustilago maydis	26.88	6.00e-24	106.00
IUUC-Vpa-130750	Vicugna pacos	39.00	1.00e-54	209.00
IUUC-Xtr-132676	Xenopus tropicalis	72.41	0.00e+00	818.00
IUUC-Xma-133871	Xiphophorus maculatus	34.84	7.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence