iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134674

Ensembl Protein ID

CAG78032

UniProt Accession

Q6C287; Q6C287_YARLI

Genbank Protein ID

CAG78032.1

Protein Name

YALI0F09856p

Genbank Nucleotide ID

CR382132

Gene Name

YALI0_F09856g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_F09856g	CAG78032	CAG78032

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-11	40.8	250	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           H ++v++++   s+++l++++ D ++kvWD+r
   Q: 250  HRGPVNDVSVdrSGRYLATAGSDSSVKVWDIR 281
           99********9666****************75 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSEAPKKKPA WKTARNKELR KDLKRVESHT QEAKEAAKKT EMLLLEEQGF LEAENEMEAT 60
HKVTQEEIKA SVDISTKKKA YDLKLPDFGP YDINFTRTGR KLLIGGRKGH VAAFDWREGR 120

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Nucleotide Sequence
(Fasta)

ATGTCTGAAG CACCAAAGAA GAAGCCGGCC TGGAAGACGG CCCGAAACAA GGAGCTCCGT 60
AAGGATCTCA AGCGGGTGGA GAGCCACACC CAGGAGGCCA AGGAGGCGGC GAAAAAGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0030688--C:preribosome, small subunit precursor
GO:0032040--C:small-subunit processome
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

yli:YALI0F09856g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	41.58	4.00e-93	333.00
IUUC-Atr-002528	Amborella trichopoda	42.51	1.00e-95	341.00
IUUC-Aly-005663	Arabidopsis lyrata	42.65	8.00e-95	338.00
IUUC-Ath-007405	Arabidopsis thaliana	42.65	1.00e-95	341.00
IUUC-Ang-009764	Aspergillus niger	45.63	4.00e-127	446.00
IUUC-Ame-011572	Astyanax mexicanus	45.91	5.00e-101	359.00
IUUC-Bdi-014459	Brachypodium distachyon	42.82	3.00e-94	337.00
IUUC-Bol-015169	Brassica oleracea	42.75	2.00e-92	332.00
IUUC-Bra-016837	Brassica rapa	43.24	2.00e-91	327.00
IUUC-Cel-018465	Caenorhabditis elegans	42.40	2.00e-100	357.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	39.01	7.00e-107	379.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	46.27	7.00e-133	465.00
IUUC-Cne-026784	Cryptococcus neoformans	46.42	2.00e-90	324.00
IUUC-Dre-028533	Danio rerio	44.78	1.00e-94	338.00
IUUC-Dse-031280	Dothistroma septosporum	43.76	2.00e-128	450.00
IUUC-Eeu-034982	Erinaceus europaeus	45.96	1.00e-61	228.00
IUUC-Fox-037980	Fusarium oxysporum	45.16	8.00e-130	455.00
IUUC-Fso-038154	Fusarium solani	44.70	2.00e-127	447.00
IUUC-Gmo-039548	Gadus morhua	45.27	2.00e-98	350.00
IUUC-Ggr-039976	Gaeumannomyces graminis	44.83	2.00e-127	447.00
IUUC-Gac-042249	Gasterosteus aculeatus	45.65	4.00e-103	366.00
IUUC-Gma-043274	Glycine max	43.78	2.00e-95	340.00
IUUC-Hvu-047436	Hordeum vulgare	44.33	3.00e-72	263.00
IUUC-Kpa-049329	Komagataella pastoris	56.40	4.00e-133	466.00
IUUC-Lpe-051501	Leersia perrieri	42.68	1.00e-89	325.00
IUUC-Loc-051736	Lepisosteus oculatus	49.32	3.00e-97	347.00
IUUC-Meu-056419	Macropus eugenii	46.40	8.00e-95	338.00
IUUC-Mor-057146	Magnaporthe oryzae	44.77	3.00e-130	456.00
IUUC-Mpo-057512	Magnaporthe poae	44.66	4.00e-129	452.00
IUUC-Mtr-058139	Medicago truncatula	43.24	2.00e-100	357.00
IUUC-Mla-059028	Melampsora laricipopulina	48.79	2.00e-106	377.00
IUUC-Mvi-060533	Microbotryum violaceum	45.96	4.00e-112	396.00
IUUC-Mac-065643	Musa acuminata	44.01	2.00e-95	340.00
IUUC-Ont-071977	Oreochromis niloticus	45.82	2.00e-100	357.00
IUUC-Oba-075525	Oryza barthii	41.28	2.00e-93	333.00
IUUC-Obr-076468	Oryza brachyantha	42.33	2.00e-95	340.00
IUUC-Ogl-077395	Oryza glaberrima	41.28	2.00e-93	333.00
IUUC-Ogu-078730	Oryza glumaepatula	41.03	9.00e-93	332.00
IUUC-Oin-079797	Oryza indica	41.03	8.00e-93	332.00
IUUC-Olo-080539	Oryza longistaminata	41.28	5.00e-93	333.00
IUUC-Oni-082635	Oryza nivara	41.03	7.00e-93	332.00
IUUC-Opu-083733	Oryza punctata	41.77	6.00e-94	336.00
IUUC-Oru-084560	Oryza rufipogon	41.03	8.00e-93	332.00
IUUC-Osa-085463	Oryza sativa	41.03	7.00e-93	332.00
IUUC-Ola-086667	Oryzias latipes	46.00	7.00e-108	382.00
IUUC-Olu-087881	Ostreococcus lucimarinus	42.51	3.00e-92	330.00
IUUC-Pma-094742	Petromyzon marinus	46.09	6.00e-94	335.00
IUUC-Ppa-095230	Physcomitrella patens	45.16	4.00e-109	386.00
IUUC-Pop-099756	Populus trichocarpa	42.57	2.00e-94	337.00
IUUC-Ppe-101354	Prunus persica	41.48	2.00e-89	320.00
IUUC-Pte-104146	Pyrenophora teres	41.71	2.00e-115	407.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	42.67	2.00e-118	417.00
IUUC-Sce-106227	Saccharomyces cerevisiae	45.98	6.00e-139	485.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	45.26	2.00e-125	440.00
IUUC-Spo-108359	Schizosaccharomyces pombe	44.95	4.00e-116	409.00
IUUC-Smo-108814	Selaginella moellendorffii	46.58	3.00e-109	387.00
IUUC-Sit-110158	Setaria italica	43.19	2.00e-90	324.00
IUUC-Sly-111569	Solanum lycopersicum	42.13	4.00e-89	320.00
IUUC-Stu-112403	Solanum tuberosum	42.55	6.00e-89	319.00
IUUC-Sbi-113839	Sorghum bicolor	42.67	5.00e-88	316.00
IUUC-Sre-115150	Sporisorium reilianum	37.57	4.00e-101	360.00
IUUC-Tru-118535	Takifugu rubripes	46.04	1.00e-107	381.00
IUUC-Tca-121165	Theobroma cacao	42.08	2.00e-92	330.00
IUUC-Tre-122114	Trichoderma reesei	45.38	2.00e-128	450.00
IUUC-Tvi-122437	Trichoderma virens	45.09	4.00e-126	442.00
IUUC-Tae-125390	Triticum aestivum	42.08	7.00e-95	338.00
IUUC-Tur-126307	Triticum urartu	42.97	1.00e-93	334.00
IUUC-Tme-127208	Tuber melanosporum	52.78	5.00e-126	442.00
IUUC-Ttr-129047	Tursiops truncatus	45.60	5.00e-104	369.00
IUUC-Uma-129320	Ustilago maydis	43.91	1.00e-104	371.00
IUUC-Vda-129926	Verticillium dahliae	45.00	9.00e-127	445.00
IUUC-Vvi-131643	Vitis vinifera	41.62	1.00e-91	328.00
IUUC-Zma-135903	Zea mays	41.94	9.00e-84	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence