iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Other/Other	84.17	0.00e+00	1089.00	IUUC-Hsa-046911

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTSSSLLSHL SSSQPLEVLL IVLVLRHRFN TVHLSDKVPG SSQPLFSQSS VPDPGLPLAA 60
GSCHCLGIAG PFGGPRAART ECAGAVLRGL GRAEAGGCFG PAAVRLPWVL RLGADLRAPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTCTTTAT GTATTATAGA GACAAATAAA AACTAATGAC CTCTTCTTCA CTGCTGAGCC 60
ATCTCTCCAG CTCCCAGCCT TTGGAGGTTT TGTTAATTGT TTTGGTATTA CGTCACAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR007330--MIT
IPR009686--Senescence/spartin

Pfam

PF06911--Senescence

SMART

SM00745--MIT

Gene Ontology

GO:0005829--C:cytosol
GO:0005811--C:lipid particle
GO:0030496--C:midbody
GO:0005741--C:mitochondrial outer membrane
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:0045202--C:synapse
GO:0009838--P:abscission
GO:0060612--P:adipose tissue development
GO:0051301--P:cell division
GO:0034389--P:lipid particle organization
GO:0030514--P:negative regulation of BMP signaling pathway
GO:0048698--P:negative regulation of collateral sprouting in absence of injury
GO:0050905--P:neuromuscular process
GO:0051881--P:regulation of mitochondrial membrane potential

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000945	Aegilops tauschii	32.21	7.00e-09	53.50
IUUC-Aml-001571	Ailuropoda melanoleuca	83.02	0.00e+00	1028.00
IUUC-Atr-002839	Amborella trichopoda	25.84	1.00e-05	44.30
IUUC-Apl-003342	Anas platyrhynchos	61.97	0.00e+00	735.00
IUUC-Aca-004468	Anolis carolinensis	59.75	0.00e+00	690.00
IUUC-Aly-005982	Arabidopsis lyrata	26.60	3.00e-11	63.20
IUUC-Ath-006815	Arabidopsis thaliana	27.13	6.00e-12	65.50
IUUC-Acl-008081	Aspergillus clavatus	23.32	6.00e-04	38.90
IUUC-Afl-008421	Aspergillus flavus	26.09	2.00e-06	47.40
IUUC-Afu-008811	Aspergillus fumigatus	25.41	4.00e-05	43.10
IUUC-Ani-009356	Aspergillus nidulans	23.00	6.00e-09	55.80
IUUC-Ang-009547	Aspergillus niger	23.32	4.00e-04	39.70
IUUC-Aor-010117	Aspergillus oryzae	26.09	2.00e-06	47.40
IUUC-Ate-010328	Aspergillus terreus	25.27	1.00e-07	51.20
IUUC-Ame-011529	Astyanax mexicanus	50.23	2.00e-176	612.00
IUUC-Bgr-012228	Blumeria graminis	23.11	7.00e-11	62.00
IUUC-Bta-013103	Bos taurus	80.39	0.00e+00	1003.00
IUUC-Bci-013688	Botrytis cinerea	26.72	1.00e-06	48.10
IUUC-Bdi-014064	Brachypodium distachyon	29.53	1.00e-10	60.80
IUUC-Bol-016309	Brassica oleracea	27.13	4.00e-12	65.90
IUUC-Bra-017489	Brassica rapa	27.13	2.00e-09	57.00
IUUC-Cel-018285	Caenorhabditis elegans	23.11	3.00e-16	80.10
IUUC-Cja-019466	Callithrix jacchus	83.86	0.00e+00	984.00
IUUC-Cfa-020238	Canis familiaris	81.63	0.00e+00	1050.00
IUUC-Cpo-021344	Cavia porcellus	80.09	0.00e+00	981.00
IUUC-Csa-024111	Chlorocebus sabaeus	84.50	0.00e+00	1085.00
IUUC-Cho-024779	Choloepus hoffmanni	71.17	0.00e+00	856.00
IUUC-Cin-025499	Ciona intestinalis	46.81	1.00e-19	88.20
IUUC-Csv-026280	Ciona savignyi	29.79	2.00e-23	102.00
IUUC-Cgl-026688	Colletotrichum gloeosporioides	21.92	4.00e-07	49.70
IUUC-Cne-026893	Cryptococcus neoformans	33.66	7.00e-05	42.40
IUUC-Dre-027489	Danio rerio	52.84	3.00e-180	624.00
IUUC-Dno-029328	Dasypus novemcinctus	82.42	0.00e+00	1041.00
IUUC-Dor-030753	Dipodomys ordii	75.44	0.00e+00	753.00
IUUC-Dse-031221	Dothistroma septosporum	23.72	5.00e-11	62.40
IUUC-Dme-031968	Drosophila melanogaster	32.31	6.00e-32	132.00
IUUC-Ete-032874	Echinops telfairi	63.06	2.00e-93	336.00
IUUC-Eca-033971	Equus caballus	83.28	0.00e+00	1045.00
IUUC-Eeu-035263	Erinaceus europaeus	82.74	0.00e+00	922.00
IUUC-Fca-036286	Felis catus	81.75	7.00e-176	609.00
IUUC-Fal-037321	Ficedula albicollis	60.03	0.00e+00	637.00
IUUC-Fox-037921	Fusarium oxysporum	23.70	4.00e-05	42.70
IUUC-Fso-038444	Fusarium solani	21.39	1.00e-05	44.30
IUUC-Gmo-039462	Gadus morhua	69.20	2.00e-91	330.00
IUUC-Ggr-039967	Gaeumannomyces graminis	26.82	8.00e-07	48.50
IUUC-Gga-041260	Gallus gallus	51.39	3.00e-160	558.00
IUUC-Gac-041547	Gasterosteus aculeatus	50.22	5.00e-178	617.00
IUUC-Gma-042931	Glycine max	27.84	3.00e-08	53.10
IUUC-Ggo-045407	Gorilla gorilla	83.76	0.00e+00	1041.00
IUUC-Hsa-046911	Homo sapiens	84.04	0.00e+00	1044.00
IUUC-Hvu-047233	Hordeum vulgare	28.35	6.00e-09	54.70
IUUC-Itr-048591	Ictidomys tridecemlineatus	83.54	0.00e+00	1038.00
IUUC-Lch-050176	Latimeria chalumnae	54.77	0.00e+00	674.00
IUUC-Lpe-050882	Leersia perrieri	28.50	4.00e-10	58.90
IUUC-Loc-052571	Lepisosteus oculatus	51.29	3.00e-167	581.00
IUUC-Lma-053077	Leptosphaeria maculans	32.86	9.00e-06	42.70
IUUC-Laf-053740	Loxodonta africana	78.44	0.00e+00	987.00
IUUC-Mcc-055063	Macaca mulatta	84.35	0.00e+00	1082.00
IUUC-Meu-056127	Macropus eugenii	58.29	0.00e+00	705.00
IUUC-Mor-057259	Magnaporthe oryzae	26.70	1.00e-09	58.20
IUUC-Mpo-057625	Magnaporthe poae	28.05	2.00e-12	67.80
IUUC-Mtr-058491	Medicago truncatula	27.07	2.00e-10	60.50
IUUC-Mla-058900	Melampsora laricipopulina	22.92	3.00e-07	49.70
IUUC-Mga-059734	Meleagris gallopavo	61.40	0.00e+00	744.00
IUUC-Mvi-060325	Microbotryum violaceum	19.90	5.00e-03	35.80
IUUC-Mmr-061457	Microcebus murinus	81.61	0.00e+00	1048.00
IUUC-Mdo-062577	Monodelphis domestica	62.00	0.00e+00	681.00
IUUC-Mmu-063257	Mus musculus	93.07	0.00e+00	1099.00
IUUC-Mac-064898	Musa acuminata	25.00	3.00e-07	50.10
IUUC-Mpu-065678	Mustela putorius furo	80.57	0.00e+00	1001.00
IUUC-Mlu-067614	Myotis lucifugus	78.93	0.00e+00	895.00
IUUC-Nfi-068348	Neosartorya fischeri	23.76	8.00e-05	42.00
IUUC-Ncr-068664	Neurospora crassa	25.00	5.00e-10	59.30
IUUC-Nle-069575	Nomascus leucogenys	84.04	0.00e+00	1048.00
IUUC-Opr-070834	Ochotona princeps	91.16	2.00e-77	283.00
IUUC-Ont-072621	Oreochromis niloticus	51.75	5.00e-176	611.00
IUUC-Oan-073131	Ornithorhynchus anatinus	67.92	6.00e-166	577.00
IUUC-Ocu-074756	Oryctolagus cuniculus	84.32	0.00e+00	1071.00
IUUC-Oba-075775	Oryza barthii	23.20	4.00e-09	56.20
IUUC-Obr-076409	Oryza brachyantha	27.98	4.00e-10	58.90
IUUC-Ogl-077634	Oryza glaberrima	28.05	2.00e-10	60.10
IUUC-Ogu-078693	Oryza glumaepatula	28.05	3.00e-10	59.70
IUUC-Oin-080082	Oryza indica	28.05	3.00e-10	59.70
IUUC-Olo-080279	Oryza longistaminata	23.71	8.00e-09	54.70
IUUC-Ome-081481	Oryza meridionalis	28.05	1.00e-10	60.80
IUUC-Oni-083049	Oryza nivara	28.05	2.00e-10	60.50
IUUC-Opu-084128	Oryza punctata	27.98	4.00e-10	60.10
IUUC-Oru-084416	Oryza rufipogon	28.05	2.00e-10	60.10
IUUC-Osa-086030	Oryza sativa	28.05	2.00e-10	60.10
IUUC-Ola-087108	Oryzias latipes	50.97	6.00e-180	624.00
IUUC-Oga-088151	Otolemur garnettii	82.16	0.00e+00	1029.00
IUUC-Oar-090075	Ovis aries	82.06	0.00e+00	1021.00
IUUC-Ptr-091392	Pan troglodytes	84.04	0.00e+00	1047.00
IUUC-Pan-092608	Papio anubis	84.35	0.00e+00	1084.00
IUUC-Psi-093926	Pelodiscus sinensis	58.67	0.00e+00	730.00
IUUC-Pma-094547	Petromyzon marinus	45.53	1.00e-55	209.00
IUUC-Pno-094899	Phaeosphaeria nodorum	23.86	7.00e-08	52.00
IUUC-Ppa-095830	Physcomitrella patens	25.48	8.00e-11	61.60
IUUC-Pfo-097424	Poecilia formosa	52.52	3.00e-172	598.00
IUUC-Pab-098036	Pongo abelii	84.19	0.00e+00	1045.00
IUUC-Pop-099177	Populus trichocarpa	26.29	1.00e-06	47.40
IUUC-Pca-101087	Procavia capensis	80.13	1.00e-136	479.00
IUUC-Ppe-101563	Prunus persica	22.13	2.00e-04	40.40
IUUC-Pva-102133	Pteropus vampyrus	81.76	0.00e+00	1031.00
IUUC-Pgr-103281	Puccinia graminis	31.33	2.00e-03	37.00
IUUC-Ptt-103905	Puccinia triticina	24.11	1.00e-10	61.20
IUUC-Pte-104229	Pyrenophora teres	22.36	1.00e-09	57.80
IUUC-Pyt-104557	Pyrenophora triticirepentis	24.06	1.00e-10	60.80
IUUC-Sha-106644	Sarcophilus harrisii	58.56	0.00e+00	700.00
IUUC-Ssl-108616	Sclerotinia sclerotiorum	27.94	6.00e-06	45.80
IUUC-Smo-109029	Selaginella moellendorffii	24.04	4.00e-11	62.40
IUUC-Sit-110774	Setaria italica	25.39	3.00e-12	66.20
IUUC-Sly-111084	Solanum lycopersicum	25.28	1.00e-07	51.20
IUUC-Stu-112484	Solanum tuberosum	25.39	2.00e-08	53.50
IUUC-Sar-113552	Sorex araneus	79.79	2.00e-156	546.00
IUUC-Sbi-114127	Sorghum bicolor	29.19	2.00e-09	57.00
IUUC-Ssc-116159	Sus scrofa	83.00	0.00e+00	959.00
IUUC-Tgu-117516	Taeniopygia guttata	60.68	0.00e+00	743.00
IUUC-Tru-118377	Takifugu rubripes	70.51	2.00e-85	310.00
IUUC-Tsy-119529	Tarsius syrichta	76.70	0.00e+00	917.00
IUUC-Tni-120666	Tetraodon nigroviridis	69.47	7.00e-86	311.00
IUUC-Tca-121317	Theobroma cacao	27.59	2.00e-11	63.90
IUUC-Tre-121928	Trichoderma reesei	22.99	7.00e-07	48.90
IUUC-Tvi-122390	Trichoderma virens	21.93	2.00e-07	50.40
IUUC-Tae-122800	Triticum aestivum	31.05	2.00e-11	63.50
IUUC-Tur-126670	Triticum urartu	42.50	6.30e-02	30.80
IUUC-Tme-127076	Tuber melanosporum	22.99	1.00e-08	54.70
IUUC-Tbe-127776	Tupaia belangeri	77.90	0.00e+00	968.00
IUUC-Ttr-128669	Tursiops truncatus	82.04	0.00e+00	1020.00
IUUC-Vda-129839	Verticillium dahliae	26.15	1.00e-12	68.20
IUUC-Vpa-130069	Vicugna pacos	79.27	6.00e-137	481.00
IUUC-Xtr-132948	Xenopus tropicalis	54.35	0.00e+00	635.00
IUUC-Xma-133239	Xiphophorus maculatus	73.01	6.00e-99	355.00
IUUC-Zma-134720	Zea mays	28.71	3.00e-09	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence