iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135470

UUCD1 version

UUC-ZeM-00041

Ensembl Protein ID

Zm00001d049230_T002

UniProt Accession

B4FST4; B4FST4_MAIZE

Genbank Protein ID

ACF85177.1; ACF85481.1; ACF85965.1; ACF86438.1; ACG25153.1; AQK49899.1; AQK49900.1

Protein Name

SKP1-like protein 1A

Genbank Nucleotide ID

BT040172; BT040476; BT040960; BT041433; EU953035; CM000780; CM000780

Gene Name

ZEAMMB73_Zm00001d049230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d049230	Zm00001d049230_T002	Zm00001d049230_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	3.20e-32	112.4	127	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe+++R+EnqWA
   Q: 127  KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWA 174
           89*********************************************9 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAAEGEKKMI TLKSSDGEEF EVEEAVAMES QTIRHMIEDD CADNGIPLPN VNSKILSKVI 60
EYCNKHVHAA AAAAAASKAG SDDVGAASAN STAASGEDLK NWDADFVKVD QATLFDLILA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCCGTATA TACCCACCCG ACCACCCACC CCGCCGCTAT CCCCAATATA TCCCCACTCT 60
TCGCCTCCTT TCTGGAGCAG CTAGGGTTCC GTCCTCGATC CGATCCGCCG AGTGCACACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000428	Aegilops tauschii	81.14	6.00e-65	238.00
IUUC-Atr-002858	Amborella trichopoda	71.93	4.00e-54	202.00
IUUC-Aly-006066	Arabidopsis lyrata	76.92	1.00e-56	211.00
IUUC-Ath-006881	Arabidopsis thaliana	75.15	9.00e-57	211.00
IUUC-Bgr-012280	Blumeria graminis	48.17	5.00e-31	126.00
IUUC-Bci-013888	Botrytis cinerea	46.97	2.00e-27	114.00
IUUC-Bdi-014448	Brachypodium distachyon	88.57	1.00e-63	234.00
IUUC-Bol-015842	Brassica oleracea	73.68	6.00e-55	205.00
IUUC-Bra-016913	Brassica rapa	73.68	6.00e-55	205.00
IUUC-Cja-019785	Callithrix jacchus	51.28	1.00e-31	128.00
IUUC-Cre-022751	Chlamydomonas reinhardtii	64.07	1.00e-46	177.00
IUUC-Cho-024854	Choloepus hoffmanni	34.94	4.00e-09	53.10
IUUC-Cin-025538	Ciona intestinalis	50.29	8.00e-33	132.00
IUUC-Cgl-026548	Colletotrichum gloeosporioides	45.18	3.00e-31	127.00
IUUC-Ete-033117	Echinops telfairi	52.02	5.00e-32	129.00
IUUC-Eeu-034817	Erinaceus europaeus	68.29	9.00e-13	63.90
IUUC-Ggr-039831	Gaeumannomyces graminis	44.79	1.00e-30	125.00
IUUC-Gma-043086	Glycine max	76.92	4.00e-58	216.00
IUUC-Hvu-047497	Hordeum vulgare	80.23	1.00e-60	224.00
IUUC-Lpe-050940	Leersia perrieri	90.29	3.00e-61	226.00
IUUC-Lma-053020	Leptosphaeria maculans	43.75	3.00e-30	124.00
IUUC-Mor-057176	Magnaporthe oryzae	43.56	2.00e-30	124.00
IUUC-Mpo-057471	Magnaporthe poae	45.40	1.00e-30	125.00
IUUC-Mtr-058258	Medicago truncatula	74.56	9.00e-56	208.00
IUUC-Mac-064537	Musa acuminata	79.29	3.00e-57	213.00
IUUC-Ncr-068658	Neurospora crassa	43.71	3.00e-30	124.00
IUUC-Oba-075637	Oryza barthii	89.77	3.00e-63	233.00
IUUC-Obr-076526	Oryza brachyantha	89.20	2.00e-68	250.00
IUUC-Ogl-077492	Oryza glaberrima	89.77	3.00e-63	233.00
IUUC-Ogu-078927	Oryza glumaepatula	89.77	3.00e-63	233.00
IUUC-Oin-079204	Oryza indica	89.77	3.00e-63	233.00
IUUC-Olo-080526	Oryza longistaminata	83.16	3.00e-60	223.00
IUUC-Ome-081685	Oryza meridionalis	89.77	3.00e-63	233.00
IUUC-Oni-082053	Oryza nivara	89.77	3.00e-63	233.00
IUUC-Opu-083354	Oryza punctata	89.77	1.00e-66	244.00
IUUC-Oru-084246	Oryza rufipogon	89.77	3.00e-63	233.00
IUUC-Osa-086133	Oryza sativa	89.77	3.00e-63	233.00
IUUC-Olu-087667	Ostreococcus lucimarinus	62.87	2.00e-43	167.00
IUUC-Oar-089762	Ovis aries	55.36	1.00e-29	122.00
IUUC-Pno-094810	Phaeosphaeria nodorum	43.83	4.00e-29	120.00
IUUC-Ppa-095274	Physcomitrella patens	70.00	2.00e-50	190.00
IUUC-Pop-099897	Populus trichocarpa	75.00	4.00e-58	216.00
IUUC-Pca-100783	Procavia capensis	43.02	2.00e-24	103.00
IUUC-Ppe-101503	Prunus persica	75.00	7.00e-58	215.00
IUUC-Ptt-103874	Puccinia triticina	51.43	3.00e-30	124.00
IUUC-Pte-104224	Pyrenophora teres	48.28	4.00e-26	110.00
IUUC-Pyt-104750	Pyrenophora triticirepentis	47.41	3.00e-26	110.00
IUUC-Sce-106387	Saccharomyces cerevisiae	48.84	2.00e-27	114.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	45.06	1.00e-29	121.00
IUUC-Smo-109307	Selaginella moellendorffii	69.46	9.00e-50	188.00
IUUC-Sit-110769	Setaria italica	97.73	3.00e-67	246.00
IUUC-Sly-111529	Solanum lycopersicum	72.09	2.00e-55	207.00
IUUC-Stu-112023	Solanum tuberosum	71.43	6.00e-55	205.00
IUUC-Sbi-114358	Sorghum bicolor	99.43	2.00e-64	237.00
IUUC-Tca-121022	Theobroma cacao	75.00	1.00e-59	221.00
IUUC-Tae-123210	Triticum aestivum	81.14	6.00e-65	238.00
IUUC-Tur-126200	Triticum urartu	81.71	2.00e-63	233.00
IUUC-Vda-129691	Verticillium dahliae	42.07	1.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence