iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114409

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G166300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g021220	Sb08g021220.1	Sb08g021220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.0	236	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   ++ ++vlpC H fha C+  w     ++s +  CP+C+
   Q: 236  CAICLEDYsvgEK-LRVLPCRHKFHAACVDLW-----LTSWRTFCPVCK 278
           ********99555.******************.....5555666****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATAQIKSRF LVLYVIVCLM AQMGDANVVL LGNNLTLSFD DIEASFSPGV KGSGVNGVVY 60
ASEPLDACSP LTIKAVKGPP SPFALIVRGG CTFDEKVKNA QDAGFKAAIV YDNENSGVLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACTG CCCAGATAAA GAGTAGATTT CTTGTTCTTT ATGTCATTGT CTGTCTCATG 60
GCTCAGATGG GAGATGCCAA TGTCGTGCTA TTGGGGAATA ATCTGACCTT GTCCTTTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_08g021220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	81.60	1.00e-107	382.00
IUUC-Atr-003055	Amborella trichopoda	69.44	2.00e-116	411.00
IUUC-Aly-006479	Arabidopsis lyrata	64.44	2.00e-102	365.00
IUUC-Ath-007344	Arabidopsis thaliana	65.49	7.00e-105	373.00
IUUC-Afl-008383	Aspergillus flavus	44.83	1.00e-11	64.30
IUUC-Ang-009856	Aspergillus niger	45.76	6.00e-12	65.50
IUUC-Bgr-012120	Blumeria graminis	53.66	2.00e-11	63.20
IUUC-Bdi-014560	Brachypodium distachyon	76.04	6.00e-170	589.00
IUUC-Bol-015569	Brassica oleracea	67.65	4.00e-104	370.00
IUUC-Bra-017689	Brassica rapa	67.53	5.00e-104	370.00
IUUC-Cre-022631	Chlamydomonas reinhardtii	32.04	2.00e-30	125.00
IUUC-Cho-024954	Choloepus hoffmanni	53.06	4.00e-14	71.60
IUUC-Dse-031214	Dothistroma septosporum	42.19	1.00e-12	67.40
IUUC-Dme-031765	Drosophila melanogaster	32.37	3.00e-32	132.00
IUUC-Gma-043776	Glycine max	73.86	4.00e-120	424.00
IUUC-Hvu-047205	Hordeum vulgare	71.48	1.00e-177	615.00
IUUC-Lpe-051192	Leersia perrieri	73.37	0.00e+00	634.00
IUUC-Mor-056917	Magnaporthe oryzae	55.56	2.00e-13	69.70
IUUC-Ncr-068696	Neurospora crassa	53.33	1.00e-13	70.50
IUUC-Oan-073710	Ornithorhynchus anatinus	30.34	3.00e-25	108.00
IUUC-Oba-075841	Oryza barthii	75.20	2.00e-177	614.00
IUUC-Obr-076703	Oryza brachyantha	75.27	0.00e+00	660.00
IUUC-Ogl-077861	Oryza glaberrima	75.46	0.00e+00	669.00
IUUC-Ogu-078205	Oryza glumaepatula	74.45	0.00e+00	632.00
IUUC-Olo-081024	Oryza longistaminata	74.43	0.00e+00	626.00
IUUC-Ome-081844	Oryza meridionalis	75.84	1.00e-176	612.00
IUUC-Oni-082382	Oryza nivara	74.82	0.00e+00	681.00
IUUC-Opu-083162	Oryza punctata	75.84	0.00e+00	676.00
IUUC-Oru-085099	Oryza rufipogon	72.94	0.00e+00	644.00
IUUC-Osa-086175	Oryza sativa	73.26	0.00e+00	663.00
IUUC-Pma-094545	Petromyzon marinus	68.89	2.00e-16	75.90
IUUC-Pop-098937	Populus trichocarpa	58.12	7.00e-103	366.00
IUUC-Spo-108083	Schizosaccharomyces pombe	28.12	4.00e-17	81.30
IUUC-Ssl-108601	Sclerotinia sclerotiorum	53.33	6.00e-14	70.90
IUUC-Sit-110044	Setaria italica	86.97	0.00e+00	673.00
IUUC-Sly-110842	Solanum lycopersicum	60.36	6.00e-101	360.00
IUUC-Sar-113580	Sorex araneus	29.34	7.00e-18	84.00
IUUC-Sre-114989	Sporisorium reilianum	42.11	1.00e-14	75.10
IUUC-Tca-121472	Theobroma cacao	58.70	2.00e-108	385.00
IUUC-Tae-125365	Triticum aestivum	69.09	4.00e-163	566.00
IUUC-Tur-126455	Triticum urartu	72.41	6.00e-161	559.00
IUUC-Uma-129467	Ustilago maydis	47.46	7.00e-13	68.90
IUUC-Vvi-131355	Vitis vinifera	74.62	2.00e-110	391.00
IUUC-Zma-135698	Zea mays	89.90	0.00e+00	656.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence