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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105226
Ensembl Protein ID ENSRNOP00000016986.5
UniProt Accession F1LQF5; F1LQF5_RAT
Genbank Protein ID EDM02570.1
Protein Name Phosphoglycerate dehydrogenase like 1; UBA domain-containing 2
Genbank Nucleotide ID AABR07019552
Gene Name Ubac2; Phgdhl1; rCG_37124
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000012710.8 ENSRNOT00000016986.8 ENSRNOP00000016986.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 7.40e-13 48.6 307 345
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA
   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e++++ l+eMGF+r +al+aLra+nn+l++A+++Ll +
   Q: 307  SEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 345
           79**********************************976 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MFTSTGSSGL YKAPLSKSLL LVPSTLSLLL TLLLPHCQKF FVYDLHAVKN DFQIWRLICG 60
RIICLDLKDA FCSGLLIYNF RIFERRFGSR KFASFLLGSW VLSALFDFIL VEAVQYLLGV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105226|UBD,UBA|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCGGAGCGCC TCGCCGGCGG ACTTCGCTCG CTGGTTGACA GTGCGCCTGC GCGGTCGCTG 60
GGGGCTCTCC ACCTCCGCCT CCCCTCCCCC TGACGCCCCG CGGGGGCTCC GGGCCCGGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105226|UBD,UBA|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like
PROSITE

PS50030--UBA
Pfam

PF00627--UBA
SMART

SM00165--UBA
Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0043130--F:ubiquitin binding
GO:1904153--P:negative regulation of retrograde protein transport, ER to cytosol
GO:0070972--P:protein localization to endoplasmic reticulum
KEGG rno:361094
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002272 Ailuropoda melanoleuca 86.57 2.00e-158 551.00
IUUC-Atr-002884 Amborella trichopoda 31.36 8.00e-06 43.50
IUUC-Apl-004075 Anas platyrhynchos 78.49 2.00e-150 525.00
IUUC-Aca-004595 Anolis carolinensis 73.04 7.00e-133 466.00
IUUC-Aly-006411 Arabidopsis lyrata 28.16 3.00e-16 79.00
IUUC-Ath-007083 Arabidopsis thaliana 26.74 1.00e-21 96.70
IUUC-Ago-007789 Ashbya gossypii 28.43 9.00e-05 40.40
IUUC-Acl-008340 Aspergillus clavatus 34.02 2.00e-05 43.10
IUUC-Afu-009037 Aspergillus fumigatus 29.90 8.00e-06 44.30
IUUC-Ang-009777 Aspergillus niger 29.80 9.00e-07 47.00
IUUC-Ame-011242 Astyanax mexicanus 60.54 7.00e-53 200.00
IUUC-Bgr-012021 Blumeria graminis 28.24 7.00e-07 47.80
IUUC-Bta-013487 Bos taurus 85.80 4.00e-159 553.00
IUUC-Bci-013918 Botrytis cinerea 29.81 2.00e-12 65.90
IUUC-Bdi-014757 Brachypodium distachyon 28.62 8.00e-21 94.00
IUUC-Bol-015531 Brassica oleracea 32.08 3.00e-12 65.50
IUUC-Bra-017181 Brassica rapa 32.70 5.00e-13 68.20
IUUC-Cja-018818 Callithrix jacchus 88.99 9.00e-163 565.00
IUUC-Cfa-021174 Canis familiaris 85.51 7.00e-158 549.00
IUUC-Cpo-021964 Cavia porcellus 90.14 6.00e-162 563.00
IUUC-Cre-022898 Chlamydomonas reinhardtii 31.96 1.00e-07 50.40
IUUC-Csa-024015 Chlorocebus sabaeus 88.99 3.00e-162 564.00
IUUC-Cho-024706 Choloepus hoffmanni 82.03 1.00e-140 492.00
IUUC-Cgl-026433 Colletotrichum gloeosporioides 26.16 8.00e-12 63.90
IUUC-Cne-026916 Cryptococcus neoformans 26.81 4.00e-04 39.30
IUUC-Dre-027633 Danio rerio 58.86 5.00e-98 350.00
IUUC-Dno-029418 Dasypus novemcinctus 88.41 3.00e-160 557.00
IUUC-Dor-030432 Dipodomys ordii 89.28 1.00e-171 595.00
IUUC-Dse-031426 Dothistroma septosporum 30.00 2.00e-13 69.30
IUUC-Ete-032599 Echinops telfairi 75.65 1.00e-128 452.00
IUUC-Eca-034280 Equus caballus 88.06 2.00e-156 544.00
IUUC-Eeu-034998 Erinaceus europaeus 86.67 8.00e-159 552.00
IUUC-Fca-036332 Felis catus 83.82 6.00e-155 540.00
IUUC-Fal-036680 Ficedula albicollis 77.97 1.00e-149 522.00
IUUC-Fox-037932 Fusarium oxysporum 25.69 1.00e-08 53.90
IUUC-Fso-038343 Fusarium solani 26.39 1.00e-04 40.40
IUUC-Gmo-039606 Gadus morhua 58.21 1.00e-82 299.00
IUUC-Ggr-039926 Gaeumannomyces graminis 26.59 6.00e-05 41.20
IUUC-Gga-041116 Gallus gallus 74.86 3.00e-139 488.00
IUUC-Gac-041765 Gasterosteus aculeatus 55.62 2.00e-83 302.00
IUUC-Gma-043400 Glycine max 26.80 2.00e-15 75.90
IUUC-Ggo-045366 Gorilla gorilla 89.57 1.00e-163 568.00
IUUC-Hsa-045893 Homo sapiens 88.99 2.00e-161 561.00
IUUC-Hvu-047737 Hordeum vulgare 28.22 1.00e-11 63.50
IUUC-Itr-048679 Ictidomys tridecemlineatus 91.16 8.00e-76 275.00
IUUC-Lpe-050798 Leersia perrieri 31.40 5.00e-11 61.60
IUUC-Loc-052511 Lepisosteus oculatus 63.19 1.00e-106 379.00
IUUC-Laf-053414 Loxodonta africana 86.38 3.00e-159 554.00
IUUC-Mcc-055111 Macaca mulatta 89.28 5.00e-163 566.00
IUUC-Meu-056905 Macropus eugenii 74.33 3.00e-112 397.00
IUUC-Mor-057083 Magnaporthe oryzae 28.16 3.00e-06 45.40
IUUC-Mpo-057326 Magnaporthe poae 25.29 2.00e-05 42.70
IUUC-Mtr-057918 Medicago truncatula 28.04 2.00e-17 82.80
IUUC-Mla-058868 Melampsora laricipopulina 25.48 3.00e-03 35.40
IUUC-Mga-059639 Meleagris gallopavo 78.48 5.00e-63 233.00
IUUC-Mvi-060380 Microbotryum violaceum 28.74 9.00e-03 34.70
IUUC-Mmr-061267 Microcebus murinus 85.62 6.00e-137 479.00
IUUC-Mdo-062640 Monodelphis domestica 81.79 2.00e-148 518.00
IUUC-Mmu-063305 Mus musculus 96.52 1.00e-176 612.00
IUUC-Mac-064533 Musa acuminata 26.67 2.00e-10 60.10
IUUC-Mpu-066519 Mustela putorius furo 84.93 4.00e-161 560.00
IUUC-Mlu-067419 Myotis lucifugus 90.23 2.00e-104 371.00
IUUC-Nfi-068304 Neosartorya fischeri 31.58 5.00e-05 41.60
IUUC-Ncr-068703 Neurospora crassa 28.12 2.00e-08 52.80
IUUC-Nle-070130 Nomascus leucogenys 87.14 9.00e-141 492.00
IUUC-Opr-070252 Ochotona princeps 89.57 3.00e-164 570.00
IUUC-Ont-072624 Oreochromis niloticus 57.75 3.00e-101 361.00
IUUC-Oan-072843 Ornithorhynchus anatinus 81.46 9.00e-70 255.00
IUUC-Ocu-073940 Oryctolagus cuniculus 90.72 5.00e-165 573.00
IUUC-Oba-075875 Oryza barthii 32.32 6.00e-15 74.30
IUUC-Obr-076147 Oryza brachyantha 26.85 9.00e-21 94.00
IUUC-Ogl-077826 Oryza glaberrima 26.51 2.00e-20 92.40
IUUC-Ogu-078996 Oryza glumaepatula 27.81 2.00e-19 89.00
IUUC-Oin-079646 Oryza indica 31.76 3.00e-15 75.50
IUUC-Olo-081041 Oryza longistaminata 32.93 3.00e-14 73.60
IUUC-Ome-081238 Oryza meridionalis 28.19 2.00e-22 99.40
IUUC-Oni-082310 Oryza nivara 27.18 8.00e-19 87.40
IUUC-Opu-083821 Oryza punctata 30.00 6.00e-14 70.50
IUUC-Oru-084586 Oryza rufipogon 27.81 1.00e-19 90.10
IUUC-Osa-085823 Oryza sativa 30.77 3.00e-14 72.00
IUUC-Ola-086714 Oryzias latipes 49.30 3.00e-60 225.00
IUUC-Oga-088600 Otolemur garnettii 88.06 1.00e-157 549.00
IUUC-Oar-090421 Ovis aries 86.77 3.00e-155 540.00
IUUC-Ptr-091509 Pan troglodytes 88.99 2.00e-161 561.00
IUUC-Pan-092468 Papio anubis 88.71 9.00e-159 552.00
IUUC-Psi-093075 Pelodiscus sinensis 79.42 2.00e-147 514.00
IUUC-Pno-095028 Phaeosphaeria nodorum 28.72 4.00e-03 35.40
IUUC-Ppa-095918 Physcomitrella patens 27.19 9.00e-20 90.50
IUUC-Pfo-096398 Poecilia formosa 58.15 3.00e-85 308.00
IUUC-Pab-097915 Pongo abelii 89.03 1.00e-159 555.00
IUUC-Pop-099311 Populus trichocarpa 25.44 4.00e-17 82.00
IUUC-Pca-100602 Procavia capensis 74.49 6.00e-129 453.00
IUUC-Ppe-101164 Prunus persica 27.62 6.00e-19 88.20
IUUC-Pva-102466 Pteropus vampyrus 89.86 7.00e-162 562.00
IUUC-Pgr-103488 Puccinia graminis 29.00 2.00e-08 52.80
IUUC-Pte-104413 Pyrenophora teres 30.85 7.00e-04 37.70
IUUC-Pyt-104659 Pyrenophora triticirepentis 29.79 1.00e-03 36.60
IUUC-Sha-106739 Sarcophilus harrisii 80.90 3.00e-143 501.00
IUUC-Sja-107960 Schizosaccharomyces japonicus 27.14 1.00e-06 47.40
IUUC-Spo-108285 Schizosaccharomyces pombe 24.54 3.00e-04 39.30
IUUC-Ssl-108440 Sclerotinia sclerotiorum 29.33 1.00e-13 69.70
IUUC-Smo-108945 Selaginella moellendorffii 28.24 3.00e-07 48.90
IUUC-Sit-110720 Setaria italica 29.32 4.00e-19 89.00
IUUC-Sly-111445 Solanum lycopersicum 26.02 2.00e-15 76.60
IUUC-Stu-112541 Solanum tuberosum 26.61 2.00e-15 75.90
IUUC-Sar-113380 Sorex araneus 68.08 2.00e-90 325.00
IUUC-Sbi-113948 Sorghum bicolor 29.41 5.00e-11 61.60
IUUC-Sre-114903 Sporisorium reilianum 27.91 1.00e-05 43.90
IUUC-Ssc-115286 Sus scrofa 89.42 1.00e-82 298.00
IUUC-Tgu-117075 Taeniopygia guttata 78.14 6.00e-144 503.00
IUUC-Tru-118110 Takifugu rubripes 55.49 9.00e-89 320.00
IUUC-Tsy-118933 Tarsius syrichta 77.27 3.00e-124 437.00
IUUC-Tni-119811 Tetraodon nigroviridis 55.56 2.00e-89 322.00
IUUC-Tca-121053 Theobroma cacao 27.36 2.00e-16 79.70
IUUC-Tre-122152 Trichoderma reesei 29.09 2.00e-09 55.80
IUUC-Tvi-122334 Trichoderma virens 30.28 8.00e-10 57.40
IUUC-Tae-125696 Triticum aestivum 27.80 2.00e-18 86.30
IUUC-Tur-126868 Triticum urartu 31.67 4.00e-14 71.60
IUUC-Tme-127059 Tuber melanosporum 29.23 5.00e-09 54.70
IUUC-Tbe-127867 Tupaia belangeri 58.84 1.00e-98 353.00
IUUC-Ttr-128543 Tursiops truncatus 88.12 1.00e-165 575.00
IUUC-Uma-129462 Ustilago maydis 27.88 2.00e-08 53.50
IUUC-Vda-129740 Verticillium dahliae 25.19 3.00e-09 55.80
IUUC-Vpa-130623 Vicugna pacos 77.68 4.00e-131 460.00
IUUC-Vvi-131299 Vitis vinifera 28.99 9.00e-13 67.40
IUUC-Xtr-132867 Xenopus tropicalis 58.10 4.00e-114 404.00
IUUC-Xma-133270 Xiphophorus maculatus 58.92 4.00e-87 314.00
IUUC-Yli-134415 Yarrowia lipolytica 26.75 4.00e-07 48.10
IUUC-Zma-135827 Zea mays 28.64 8.00e-15 74.30
Created Date 25-Jun-2017

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