iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++  kd++  l+CgH fh dC+++w        ++ +CP+C+
   Q: 319  CIICQDEYeaKDEVGELRCGHRFHIDCVNQW------LVRKNSCPVCK 360
           ********88777999***************......999999****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE 60
TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS NFKIKKTKKK NKNKGSSSYN 120

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Nucleotide Sequence
(Fasta)

CCCAAACTTC AATTTTCGCT CAAATTTGGA CGACTAATCA GTTATGTGAC GCACCAAATA 60
TTTTCGACGA TTTATCACCT TTTATTATTC CTTTAATCTC GATCCAGCAA ATCCGGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000531	Aegilops tauschii	39.37	6.00e-37	147.00
IUUC-Aly-006238	Arabidopsis lyrata	89.65	3.00e-163	566.00
IUUC-Bdi-014850	Brachypodium distachyon	55.38	2.00e-38	150.00
IUUC-Bol-015344	Brassica oleracea	61.82	5.00e-109	386.00
IUUC-Bra-016878	Brassica rapa	66.76	3.00e-118	417.00
IUUC-Gma-044193	Glycine max	43.27	8.00e-64	236.00
IUUC-Hvu-047759	Hordeum vulgare	51.63	6.00e-39	152.00
IUUC-Lpe-051518	Leersia perrieri	36.76	3.00e-35	141.00
IUUC-Mtr-058459	Medicago truncatula	42.03	1.00e-64	239.00
IUUC-Mac-065197	Musa acuminata	37.62	2.00e-46	179.00
IUUC-Oba-075787	Oryza barthii	48.72	2.00e-36	144.00
IUUC-Obr-076180	Oryza brachyantha	48.43	8.00e-37	145.00
IUUC-Ogl-077470	Oryza glaberrima	47.45	5.00e-33	134.00
IUUC-Ogu-078948	Oryza glumaepatula	42.08	1.00e-40	159.00
IUUC-Oin-079579	Oryza indica	47.45	2.00e-33	135.00
IUUC-Ome-081811	Oryza meridionalis	42.08	1.00e-40	159.00
IUUC-Oni-082479	Oryza nivara	39.18	4.00e-36	144.00
IUUC-Opu-083327	Oryza punctata	39.53	5.00e-37	147.00
IUUC-Oru-085182	Oryza rufipogon	42.15	2.00e-41	162.00
IUUC-Osa-086292	Oryza sativa	42.08	1.00e-40	159.00
IUUC-Pop-099627	Populus trichocarpa	44.27	2.00e-74	271.00
IUUC-Ppe-102027	Prunus persica	48.76	2.00e-66	245.00
IUUC-Sly-111420	Solanum lycopersicum	45.05	4.00e-60	224.00
IUUC-Stu-112746	Solanum tuberosum	45.18	3.00e-60	224.00
IUUC-Tca-121581	Theobroma cacao	47.84	2.00e-77	281.00
IUUC-Tae-124850	Triticum aestivum	43.51	2.00e-43	169.00
IUUC-Tur-126099	Triticum urartu	57.38	8.00e-38	149.00
IUUC-Vvi-131571	Vitis vinifera	39.74	4.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence