iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_016403	EOY24942	EOY24942
TCM_016403	EOY24949	EOY24949
TCM_016403	EOY24946	EOY24946
TCM_016403	EOY24948	EOY24948
TCM_016403	EOY24947	EOY24947

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-23	81.7	845	882

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           H+ + ++++f    + t l+sGsdD+++k+W++++  +l
   Q: 845  HEKRAWSVDFsrvyP-TKLASGSDDCSVKLWSISEKSCL 882
           888899****99766.99*************98776665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDGGLSDEVA PIDAAEGTHL QGKEVEYLMK PDNCNMLESR EMVIPDEVNT IESSFHVLGN 60
MLEGKKVNRS IGPVNVSEHG CSSPRTIDDA NDMVEELTVR NYNGSNLPMV GTSNNRERMQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAG GACTATCTGA CGAAGTAGCT CCAATAGATG CGGCTGAGGG GACTCACCTC 60
CAGGGTAAAG AGGTTGAGTA TTTGATGAAA CCTGACAACT GCAACATGTT GGAGTCCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR002469--Peptidase_S9B_N
IPR000719--Prot_kinase_dom
IPR001245--Ser-Thr/Tyr_kinase_cat_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07714--Pkinase_Tyr
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0016874--F:ligase activity
GO:0004672--F:protein kinase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	48.16	0.00e+00	782.00
IUUC-Atr-002506	Amborella trichopoda	45.67	0.00e+00	743.00
IUUC-Aly-005954	Arabidopsis lyrata	52.62	0.00e+00	1037.00
IUUC-Ath-007104	Arabidopsis thaliana	52.48	0.00e+00	1028.00
IUUC-Bdi-014698	Brachypodium distachyon	46.69	0.00e+00	773.00
IUUC-Bol-015237	Brassica oleracea	52.59	0.00e+00	989.00
IUUC-Bra-017767	Brassica rapa	50.99	0.00e+00	934.00
IUUC-Gma-044249	Glycine max	53.42	0.00e+00	1069.00
IUUC-Hvu-047750	Hordeum vulgare	48.60	0.00e+00	791.00
IUUC-Lpe-051349	Leersia perrieri	45.58	0.00e+00	809.00
IUUC-Mtr-058593	Medicago truncatula	55.46	0.00e+00	1039.00
IUUC-Mac-065358	Musa acuminata	43.08	0.00e+00	740.00
IUUC-Oba-075097	Oryza barthii	44.82	0.00e+00	656.00
IUUC-Obr-076441	Oryza brachyantha	49.28	0.00e+00	812.00
IUUC-Ogl-077669	Oryza glaberrima	50.00	0.00e+00	797.00
IUUC-Ogu-078009	Oryza glumaepatula	44.92	0.00e+00	658.00
IUUC-Oin-079775	Oryza indica	48.87	0.00e+00	798.00
IUUC-Olo-080230	Oryza longistaminata	42.27	0.00e+00	636.00
IUUC-Ome-081669	Oryza meridionalis	44.81	0.00e+00	656.00
IUUC-Oni-082065	Oryza nivara	44.01	0.00e+00	659.00
IUUC-Opu-083153	Oryza punctata	43.77	0.00e+00	659.00
IUUC-Oru-084928	Oryza rufipogon	43.37	0.00e+00	656.00
IUUC-Osa-085875	Oryza sativa	48.24	0.00e+00	796.00
IUUC-Pop-098964	Populus trichocarpa	63.00	0.00e+00	1327.00
IUUC-Ppe-101771	Prunus persica	60.37	0.00e+00	1211.00
IUUC-Sit-110269	Setaria italica	51.19	0.00e+00	783.00
IUUC-Sly-111360	Solanum lycopersicum	50.62	0.00e+00	991.00
IUUC-Sbi-114133	Sorghum bicolor	49.71	0.00e+00	771.00
IUUC-Tae-123049	Triticum aestivum	49.31	0.00e+00	805.00
IUUC-Tur-126357	Triticum urartu	47.23	0.00e+00	746.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence