iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-086235

UUCD1 version

UUC-OrS-01293

Ensembl Protein ID

OS06T0125800-01

UniProt Accession

Q9LWV9; Q9LWV9_ORYSJ

Genbank Protein ID

ADY16682.1; ADY16683.1; BAA90806.1; BAF18567.1; BAG90854.1; BAG96671.1; BAS95917.1; EAZ35669.1

Protein Name

E3 ligase; Os06g0125800 protein; Zinc finger protein-like; cDNA clone:006-205-F10, full insert sequence; cDNA clone:J013144A04, full insert sequence

Genbank Nucleotide ID

HQ123581; HQ123582; AP001168; AP008212; AK068302; AK104425; AP014962; CM000143

Gene Name

BBI1; Os06g0125800; OsJ_19955; OSNPB_060125800; P0425F02.32

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS06G0125800	OS06T0125800-01	OS06T0125800-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	21221134

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.3	213	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ f  ++ +++l C+H +h+ C+ +w       +    CP+C+
   Q: 213  CPICLSAFrrRETLITLACKHSYHEGCIARW------LKIDKACPVCK 254
           ******996533388899*************......**********7 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MATVGQPDAM RRITVHYVNP PPIAGAGEAH VDGLDDEVLD YVIGDVLQDQ EGLYQSILYG 60
KYGDDMRGAR NTALAQSDGL HYYYHGENSS GEATTSRNSE IDQQIEYDLV FARQLQAMDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAACAAAG AATCCGTCCA GCCTTGAGAA GCAGAGAAGA GGAGAGAAAC AAGAGACAGA 60
CAGACAGAGA TAGAGTAACT GAGTAAGCAT CTCGATCTTG GCATGTTCTT TCTTCTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

osa:4339966

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000951	Aegilops tauschii	52.51	8.00e-40	155.00
IUUC-Bdi-014927	Brachypodium distachyon	55.31	2.00e-63	234.00
IUUC-Hvu-047524	Hordeum vulgare	51.11	3.00e-57	213.00
IUUC-Lpe-050896	Leersia perrieri	85.11	9.00e-123	431.00
IUUC-Oba-075303	Oryza barthii	100.00	3.00e-157	546.00
IUUC-Obr-076804	Oryza brachyantha	76.14	9.00e-96	341.00
IUUC-Ogl-077531	Oryza glaberrima	100.00	3.00e-157	546.00
IUUC-Ogu-078538	Oryza glumaepatula	99.62	2.00e-156	543.00
IUUC-Oin-079131	Oryza indica	100.00	3.00e-157	546.00
IUUC-Olo-080329	Oryza longistaminata	99.20	2.00e-70	257.00
IUUC-Ome-081873	Oryza meridionalis	90.73	8.00e-141	493.00
IUUC-Oni-082037	Oryza nivara	100.00	3.00e-157	546.00
IUUC-Opu-084053	Oryza punctata	89.45	2.00e-141	493.00
IUUC-Oru-084307	Oryza rufipogon	99.62	3.00e-156	542.00
IUUC-Sit-110614	Setaria italica	47.37	7.00e-46	176.00
IUUC-Sbi-114843	Sorghum bicolor	55.76	8.00e-67	245.00
IUUC-Tae-125921	Triticum aestivum	53.48	4.00e-64	236.00
IUUC-Tur-126380	Triticum urartu	51.28	1.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence