iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109246

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377602

Gene Name

SELMODRAFT_443911

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_443911	EFJ20595	EFJ20595

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.60e-15	55.7	475	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +Cg  g+    l++C+ C  ++H +C++ s +++lp+ + w+Cp+C+
   Q: 475  CVLCGMDGN----LICCDGCPAAYHSRCVGVS-KSTLPEGD-WYCPECT 517
           999999999....*******************.*******7.******7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEEEEDNAEL VGRSVRKYFQ GHGYFGGTVV AYDKSSKYFR VKYADGDREE VELHELREIL 60
VDCGSDSGAP PKRSRGRPRK IADANGTNGE LIQAMNYKDL VAWEVAKALK RHRPESEPGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGG AGGAGGACAA TGCCGAGCTC GTGGGAAGAT CGGTGAGGAA GTATTTCCAG 60
GGGCATGGAT ATTTCGGTGG GACAGTGGTG GCCTATGACA AATCGAGCAA ATATTTCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR018501--DDT_dom
IPR000116--HMGA
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

PRINTS

PR00930--HIGHMOBLTYIY

SMART

SM00384--AT_hook
SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

smo:SELMODRAFT_443911

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002497	Amborella trichopoda	38.52	3.00e-68	253.00
IUUC-Bdi-014962	Brachypodium distachyon	36.32	6.00e-63	236.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	35.29	5.00e-05	38.10
IUUC-Fso-038262	Fusarium solani	41.82	2.00e-11	63.90
IUUC-Hvu-047397	Hordeum vulgare	38.15	2.00e-59	224.00
IUUC-Lpe-051272	Leersia perrieri	40.62	8.00e-63	235.00
IUUC-Oba-075125	Oryza barthii	39.20	1.00e-67	251.00
IUUC-Ogl-077936	Oryza glaberrima	39.20	8.00e-68	252.00
IUUC-Ogu-078676	Oryza glumaepatula	39.20	1.00e-67	251.00
IUUC-Olo-080881	Oryza longistaminata	36.24	9.00e-63	235.00
IUUC-Ome-081742	Oryza meridionalis	36.24	7.00e-63	236.00
IUUC-Opu-083405	Oryza punctata	39.77	8.00e-67	249.00
IUUC-Oru-084745	Oryza rufipogon	39.20	1.00e-66	248.00
IUUC-Ppe-101582	Prunus persica	39.45	5.00e-68	252.00
IUUC-Spo-108017	Schizosaccharomyces pombe	31.51	4.00e-10	58.90
IUUC-Sit-110833	Setaria italica	36.67	1.00e-58	221.00
IUUC-Sbi-114633	Sorghum bicolor	38.83	3.00e-70	260.00
IUUC-Tca-121553	Theobroma cacao	37.68	6.00e-73	269.00
IUUC-Tre-121959	Trichoderma reesei	38.18	1.00e-09	58.50
IUUC-Tvi-122553	Trichoderma virens	38.18	1.00e-09	58.20
IUUC-Vda-129876	Verticillium dahliae	51.11	2.00e-08	53.50
IUUC-Vvi-131129	Vitis vinifera	38.53	4.00e-65	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence