iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017084

Ensembl Protein ID

Bra022060.1-P

UniProt Accession

M4DZW3; M4DZW3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022060	Bra022060.1	Bra022060.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.10e-71	240.4	109	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl N gNtC++ SvLQc +++ +l ++l   k++ ++n     +++ ++lksl++ +e  + s+    + +++ + l+ +++ f+ ++q+Da+Efl
   Q: 109  GLYNSGNTCFIASVLQCFTHTVPLLDALRYyKYQDTCNC---GNESFCVLKSLRDHIELALRSSGYDLQIHRFRDNLNYFSSDFQINNQEDAHEFL 201
           9***************************99777777876...568**************99*********************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           + +ld+le+           +++      + +       +++ ++++++F+g+l s++ c +c+++s+ +ep +  sl++ + e     +l+++Le
   Q: 202  QSFLDKLERCS--------LDLT------SRNTPGTVVSSQGVNIVDNVFGGRLVSKLHCCNCNSISEIFEPSVGWSLEIDDVE-----DLSSALE 278
           *********88........2222......22223445789999*****************************************.....9****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG 288
           sft  e+le+  ++ c++ck+k+  ek+lk++klP v ++hLkRf  ++++   eki+k v fpleLd+ p+++s+e+  ++++kY L+a+v H+G
   Q: 279  SFTCVEKLED--QLTCDECKEKVSKEKQLKFDKLPLVATFHLKRF--KNDGVYMEKIFKDVRFPLELDMLPYMSSNEN-PEVSTKYYLYAMVEHQG 369
           ********95..8********************************..67778999********************665.557************** PP
   S: 289  .slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            +++ GHY +yv++  g W +fdD kV+ ++ee vl+   ++aY+lfY r
   Q: 370  sGVHYGHYSSYVRSAPGTWHHFDDAKVRRISEECVLS---KNAYMLFYAR 416
           *************************************...********87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASSDPPPSP KIENPVKTLD DESSPTAPIR ALVTHSLALS SPIRQIQNPV ESSSSPSNNE 60
CRDSQITPAG SYMPSFEYLS DDDDDHKIEP AEPFSWSYLK NEPTGVGAGL YNSGNTCFIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGA GCGATCCACC GCCGTCTCCT AAAATCGAAA ACCCAGTCAA AACCCTAGAC 60
GACGAGTCTT CCCCCACAGC GCCAATTCGA GCCCTTGTTA CTCACTCGCT AGCCCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000766	Aegilops tauschii	43.43	2.00e-71	263.00
IUUC-Aly-005458	Arabidopsis lyrata	57.22	0.00e+00	724.00
IUUC-Ath-007509	Arabidopsis thaliana	57.01	0.00e+00	733.00
IUUC-Bol-015756	Brassica oleracea	92.12	0.00e+00	1263.00
IUUC-Hvu-047714	Hordeum vulgare	45.26	9.00e-83	301.00
IUUC-Mtr-057794	Medicago truncatula	39.74	8.00e-94	337.00
IUUC-Oba-075717	Oryza barthii	42.58	8.00e-73	268.00
IUUC-Tae-125005	Triticum aestivum	45.16	8.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence