iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098814

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 21 family protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_827644; POPTR_0003s09120g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s09120	POPTR_0003s09120.1	POPTR_0003s09120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.20e-78	265.8	264	569

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl N gNtCY+N+vLQc +++ +l ++l +  +++++ +   ++  + l+ +++ +e  + s+ k  +p +l++ l ++++ f+ y+q+Da
   Q: 264  GLFNKGNTCYINAVLQCFTHTVPLVQALRS-CNHAMPCR---TEGFCALCVIRDHIELSLASSGKILEPLKLVNNLDSISSFFRRYQQEDA 350
           99****************************.44444433...456688899999999999******************************* PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetk 183
           +Efl++ll++le+++              d    s+  ++   ++ k++++++F+g+l s+++c +c++ s ++ep +dlsl++++ +   
   Q: 351  HEFLQCLLERLERSC-------------LD----SSLTDDISSSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDAD--- 421
           ***************.............22....2233445788999*****************************************... PP
   S: 184  keslqdcLesftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqk 273
             +lq +Lesft+ e++e+++  + ce+ck+++  ek+l+l+k P +  lhLkRf+ +    s eki k+vefpleLdl+p+ +++++++ 
   Q: 422  --TLQIALESFTNVEKIEDSETkFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDG--TSVEKIGKHVEFPLELDLKPYINDNDSND- 507
           ..9**************987644********************************8877..5889******************9977766. PP
   S: 274  ekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +  kY+L+avvvH+G sl sGHYv+y++++ + W ++dD +V++ +ee vl+   + aY+lfY r
   Q: 508  VGFKYQLYAVVVHKGySLTSGHYVCYIRSSPDTWHKLDDPEVSKEREEFVLS---QAAYILFYAR 569
           7***************************************************...********87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEVSTEAGVD VPSKTKTLDS KSFIQAYGFS TQSQIEALNN ELLGDPVISP NSELSCGGQY 60
LVPLSSNSNG FSLTSTSMPR SEETLIGTLL PHILTSGSQI SVSSQSNQDW SGSLVANGNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTTT CAACTGAAGC AGGCGTTGAC GTGCCTTCTA AAACCAAAAC CCTAGATTCC 60
AAATCTTTTA TTCAGGCTTA TGGCTTTTCT ACCCAGTCAC AGATTGAAGC CCTAAATAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s09120g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000766	Aegilops tauschii	47.75	5.00e-85	308.00
IUUC-Atr-002708	Amborella trichopoda	51.93	3.00e-103	369.00
IUUC-Aly-006314	Arabidopsis lyrata	49.51	2.00e-107	383.00
IUUC-Ath-007509	Arabidopsis thaliana	54.47	5.00e-105	374.00
IUUC-Ago-007836	Ashbya gossypii	28.13	3.00e-35	143.00
IUUC-Bol-015756	Brassica oleracea	50.00	2.00e-104	372.00
IUUC-Bra-017262	Brassica rapa	51.52	3.00e-103	369.00
IUUC-Hvu-047714	Hordeum vulgare	49.44	1.00e-96	347.00
IUUC-Mtr-057796	Medicago truncatula	52.43	2.00e-109	389.00
IUUC-Oba-075717	Oryza barthii	45.45	1.00e-88	320.00
IUUC-Ogu-078191	Oryza glumaepatula	48.32	2.00e-87	316.00
IUUC-Oin-079634	Oryza indica	48.32	2.00e-87	316.00
IUUC-Oni-082505	Oryza nivara	49.16	1.00e-90	327.00
IUUC-Ppe-101932	Prunus persica	53.86	3.00e-159	554.00
IUUC-Sly-111383	Solanum lycopersicum	46.17	7.00e-133	467.00
IUUC-Stu-112476	Solanum tuberosum	43.93	8.00e-133	467.00
IUUC-Tae-125005	Triticum aestivum	49.73	7.00e-98	351.00
IUUC-Vvi-131459	Vitis vinifera	54.64	3.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence