iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112220

Ensembl Protein ID

PGSC0003DMT400045167

UniProt Accession

M1BH75; M1BH75_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400017520	PGSC0003DMT400045167	PGSC0003DMT400045167

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-07	32.1	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh +C+  w       + + +CPlCr
   Q: 144  CSVCLSEFldDESLRLLPkCSHAFHVTCIDTW------LKSHSNCPLCR 186
           ********9866699999**************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MVSVNSSRTW APPHMSTRDC SQGFCSLYCP QWCYIIFPPP PPFDFPADDD SGPNFSPLVI 60
GIIGILTSAF LLVSYYVIMS KCCGHRIGLR SRENHLNDSE LEENDPSIHE AWNVNTTGLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTTCACCT TCACCCTTTC AAGGCAAACA TTATAATTTC TCTCTGTTTC ATTCATCCAT 60
TGCTCTTCAC TTCCATCTTA TATCAGTATA TTAGGAATAG TCCTCACTTC AATTTTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102600372

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	45.69	3.00e-69	254.00
IUUC-Ath-006705	Arabidopsis thaliana	42.47	9.00e-57	212.00
IUUC-Bdi-014591	Brachypodium distachyon	55.83	4.00e-45	174.00
IUUC-Gma-042838	Glycine max	50.48	1.00e-61	229.00
IUUC-Hvu-047701	Hordeum vulgare	58.76	8.00e-54	202.00
IUUC-Lpe-051459	Leersia perrieri	55.56	3.00e-55	207.00
IUUC-Mtr-058411	Medicago truncatula	45.00	9.00e-65	239.00
IUUC-Mac-065580	Musa acuminata	43.71	1.00e-63	236.00
IUUC-Oba-075508	Oryza barthii	58.21	4.00e-56	210.00
IUUC-Obr-076483	Oryza brachyantha	50.00	2.00e-53	201.00
IUUC-Ogl-077644	Oryza glaberrima	58.33	2.00e-51	195.00
IUUC-Ogu-078315	Oryza glumaepatula	56.80	7.00e-55	206.00
IUUC-Oin-079716	Oryza indica	58.33	2.00e-51	195.00
IUUC-Olo-081066	Oryza longistaminata	55.61	1.00e-54	205.00
IUUC-Ome-081279	Oryza meridionalis	55.88	3.00e-51	194.00
IUUC-Oni-082896	Oryza nivara	58.33	2.00e-51	195.00
IUUC-Opu-083498	Oryza punctata	56.04	2.00e-56	211.00
IUUC-Oru-084696	Oryza rufipogon	56.80	8.00e-55	206.00
IUUC-Osa-086259	Oryza sativa	56.80	8.00e-55	206.00
IUUC-Pop-099246	Populus trichocarpa	51.42	3.00e-75	274.00
IUUC-Ppe-101720	Prunus persica	49.86	3.00e-70	257.00
IUUC-Sit-109894	Setaria italica	57.21	4.00e-54	204.00
IUUC-Sly-110835	Solanum lycopersicum	93.06	5.00e-159	552.00
IUUC-Sbi-114789	Sorghum bicolor	60.10	2.00e-52	198.00
IUUC-Tca-121189	Theobroma cacao	53.49	2.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence