iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114354

UUCD1 version

UUC-SoB-01722

Ensembl Protein ID

Sb02g026980.1

UniProt Accession

A0A1B6QD09; A0A1B6QD09_SORBI

Genbank Protein ID

KXG35805.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G230400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g026980	Sb02g026980.1	Sb02g026980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.20e-71	240.7	354	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl NlgN+CY N vLQcL+++++l+ +lle +++++++++     + +++++l+k++ e  k+ k+ vsp+ +l +l+++ ++f   +++Da+Ef
   Q: 354  FGLYNLGNSCYANVVLQCLAFTRPLTAYLLEgHHSQNCSKN-----EWCFMCELEKVLIEG-KHGKSLVSPTGILCHLNEIGVSFGHGAEEDAHEF 443
           69*****************************7777777765.....67**********998.99999***************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           l++ +d+++++  k       e          +++  ++  ++++l++ +F+g l+s+ikc +c+ +s++ e  ldl++++ g+ +    +l+ +L
   Q: 444  LRYAIDKMQSASIK-------E---------AKKNGIQQLAEETTLVHFIFGGYLRSKIKCTKCQVSSKQSERILDLTVEIDGDIN----TLDGAL 519
           **********9922.......2.........2233456778999*****************************************6....7***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           + ft+ e l+g+n+y+c++c+++ +a+kkl++ + P++L++ LkR+    + ++    +k v+fp++L+ls+++++++++   +  Y L+avvvH+
   Q: 520  RRFTSSEVLDGDNRYHCSRCNSYERAQKKLTILEAPNILTIALKRY----QSGVLGETSKVVKFPEHLNLSQYMSRTDDS---SPVYTLYAVVVHH 608
           **********************************************....45888899******************6665...79*********** PP
   S: 288  G...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
                + sGHYv+yvk+++gkW ++dD+kV++v+ ++vl+   + aY+l+Y r
   Q: 609  NvsnATVSGHYVCYVKDSQGKWHEMDDNKVKPVSIQKVLS---KCAYMLLYAR 658
           86334569********************************...9*******87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEVPKSVALV AALAFVVLGA LATRWLQRME ERNEEVRRLA LLAAAEVEAI EKEAAAYHYG 60
QYGGFVRASD LPEVPSLWTT AQEVAAAPLW TTQAQEVAPV LAPKEVEAEA AVAVSATAGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGC CCAAGTCGGT GGCGCTTGTG GCCGCCCTGG CGTTCGTGGT GCTGGGAGCG 60
CTGGCCACCA GGTGGCTGCA GCGCATGGAG GAGCGGAACG AGGAGGTGCG CCGCCTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047748	Hordeum vulgare	50.97	0.00e+00	690.00
IUUC-Opu-083249	Oryza punctata	50.61	0.00e+00	711.00
IUUC-Sit-109941	Setaria italica	70.59	0.00e+00	942.00
IUUC-Tae-124405	Triticum aestivum	50.93	0.00e+00	683.00
IUUC-Tur-126154	Triticum urartu	53.89	0.00e+00	652.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence