iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121203

Ensembl Protein ID

EOY04489

UniProt Accession

A0A061EQ79; A0A061EQ79_THECC

Genbank Protein ID

EOY04489.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001882

Gene Name

TCM_019731

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_019731	EOY04489	EOY04489

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-33	115.1	271	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelMrdPvv++sG+tydr+sI +w++sg++tcP+t+q+l++ +l+Pn +lr+li  wc e+++
   Q: 271  IPADFRCPISLELMRDPVVVASGQTYDRESINQWIESGHNTCPKTGQTLAHISLIPNRALRNLIAMWCREQRI 343
           8*******************************************************************99875 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAVSPQVFPP RKRRPSAGSF LSPKLTDLNL VQSLLSLSQE ISSLKPLQFL LKRNSLSTIN 60
KAKLLAILFE EPLRNPVSNF FSPSTILCFE EMYIVLQRIK TLMEDCSNGS MMWLLLQIKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTTTTTT ATAGGAATGT AAAAGGACAA ACTCTATCTT GTGTACAACT TGTTCTTTCT 60
GTAATCAACT ACTGCTATAC CTTCTTCTTC AATTCAAAGA CTTGAGAACT AACCCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	51.60	1.00e-78	285.00
IUUC-Atr-002566	Amborella trichopoda	47.57	1.00e-142	499.00
IUUC-Aly-005828	Arabidopsis lyrata	61.29	0.00e+00	746.00
IUUC-Ath-007101	Arabidopsis thaliana	62.39	0.00e+00	743.00
IUUC-Bdi-014833	Brachypodium distachyon	48.44	1.00e-110	393.00
IUUC-Bol-015511	Brassica oleracea	60.32	0.00e+00	767.00
IUUC-Bra-017197	Brassica rapa	59.68	0.00e+00	758.00
IUUC-Gma-043531	Glycine max	63.45	0.00e+00	695.00
IUUC-Hvu-047557	Hordeum vulgare	47.65	4.00e-118	417.00
IUUC-Lpe-051445	Leersia perrieri	45.86	2.00e-121	429.00
IUUC-Mtr-058241	Medicago truncatula	63.04	0.00e+00	695.00
IUUC-Mac-065033	Musa acuminata	46.23	1.00e-114	406.00
IUUC-Oba-075591	Oryza barthii	46.79	1.00e-124	439.00
IUUC-Obr-076550	Oryza brachyantha	43.60	1.00e-107	383.00
IUUC-Ogl-077709	Oryza glaberrima	46.79	1.00e-124	439.00
IUUC-Ogu-078626	Oryza glumaepatula	46.79	1.00e-124	439.00
IUUC-Oin-080113	Oryza indica	46.63	4.00e-124	437.00
IUUC-Olo-080301	Oryza longistaminata	42.89	3.00e-74	272.00
IUUC-Ome-081924	Oryza meridionalis	47.74	1.00e-125	442.00
IUUC-Oni-082284	Oryza nivara	46.79	1.00e-124	439.00
IUUC-Opu-083971	Oryza punctata	47.33	1.00e-121	429.00
IUUC-Oru-084898	Oryza rufipogon	47.28	3.00e-128	451.00
IUUC-Osa-085986	Oryza sativa	48.85	1.00e-123	436.00
IUUC-Olu-087884	Ostreococcus lucimarinus	56.72	4.00e-23	97.80
IUUC-Pop-099292	Populus trichocarpa	71.62	0.00e+00	941.00
IUUC-Ppe-101643	Prunus persica	70.99	0.00e+00	944.00
IUUC-Sit-110652	Setaria italica	46.64	1.00e-130	459.00
IUUC-Sly-111346	Solanum lycopersicum	65.80	0.00e+00	872.00
IUUC-Stu-112435	Solanum tuberosum	65.23	0.00e+00	840.00
IUUC-Sbi-114567	Sorghum bicolor	45.68	2.00e-116	412.00
IUUC-Tae-124205	Triticum aestivum	47.71	3.00e-109	388.00
IUUC-Vvi-131545	Vitis vinifera	70.38	0.00e+00	855.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence