iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007287

UUCD1 version

UUC-ArT-00353

Ensembl Protein ID

AT2G46494.1

UniProt Accession

P0CH02; Q3EBF2; AT21B_ARATH

Genbank Protein ID

AEC10706.1

Protein Name

Putative RING-H2 finger protein ATL21B; RING-type E3 ubiquitin transferase ATL21B

Genbank Nucleotide ID

AC006418

Gene Name

ATL21B; At2g46494; F11C10; F13A10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G46494	AT2G46494.1	AT2G46494.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.8	316	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  k+ +++ p C H+fha+C+  w       + + +CPlCr
   Q: 316  CPICLSEYvsKETVRFIPeCDHCFHAKCIDVW------LKIHGSCPLCR 358
           ********99666999999*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MIISKQLFLL FFLLFFIFPL RHASNPSKCS SSNSRPHRCG PLEVPIRFPF CDHPLFNLLC 60
TNLNNTVLQL PMSGTFFVQY IDYRKQQIYI NDPENCLAKR LLTFNISGSP FSPRFDTLYT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAATCT CAAAACAACT TTTCCTTTTA TTTTTCCTCC TCTTCTTCAT CTTCCCTCTC 60
CGACACGCCT CAAACCCTAG TAAATGTTCT TCTTCTAATT CGAGACCACA CAGATGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G46494

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006350	Arabidopsis lyrata	78.74	4.00e-142	497.00
IUUC-Bol-016430	Brassica oleracea	73.05	2.00e-122	432.00
IUUC-Bra-016654	Brassica rapa	73.63	5.00e-126	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence