iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044096

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100786109; GLYMA_10G202500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G34640	GLYMA10G34640.1	GLYMA10G34640.1
GLYMA10G34640	GLYMA10G34640.2	GLYMA10G34640.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	35.7	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+++  +d +++lp CgH fh +C+  w       +++ +CP+Cr
   Q: 87   CTVCLSEYqgEDMLRILPyCGHSFHVTCIDLW------LQQNSTCPVCR 129
           99******8766699*****************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MISSGINLVM TVIGFAVSTM FIVFVCTRLI CARIHLNAAR RSFPIASRSN LSMMERGCHG 60
LERVTVAKFP TKKYSDKFFA AAENSQCTVC LSEYQGEDML RILPYCGHSF HVTCIDLWLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACACAG CTAATGAAAT AAAAAGTCTA CTTCCCCATT GAGAGAGTCA TCCCTCATCT 60
TCTCTGTTCT ATAGCAAAAA AACAGTAATC ATAACTTGAT TTAGATCTCA AAAATCTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100786109

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002798	Amborella trichopoda	64.43	1.00e-65	243.00
IUUC-Bdi-014707	Brachypodium distachyon	40.20	2.00e-32	132.00
IUUC-Fal-036671	Ficedula albicollis	27.57	2.00e-13	70.50
IUUC-Hvu-047120	Hordeum vulgare	41.67	2.00e-25	109.00
IUUC-Lch-050541	Latimeria chalumnae	42.86	6.00e-14	72.80
IUUC-Lpe-051633	Leersia perrieri	41.01	9.00e-34	136.00
IUUC-Mac-065561	Musa acuminata	62.98	7.00e-62	230.00
IUUC-Oba-075916	Oryza barthii	36.82	2.00e-31	128.00
IUUC-Ogl-077876	Oryza glaberrima	36.68	3.00e-31	128.00
IUUC-Ogu-078546	Oryza glumaepatula	48.89	7.00e-32	130.00
IUUC-Oin-079354	Oryza indica	37.50	7.00e-29	121.00
IUUC-Ome-081563	Oryza meridionalis	42.03	5.00e-24	104.00
IUUC-Opu-083989	Oryza punctata	38.58	2.00e-35	142.00
IUUC-Osa-086218	Oryza sativa	36.82	2.00e-31	129.00
IUUC-Sit-110584	Setaria italica	50.50	1.00e-24	106.00
IUUC-Sly-110875	Solanum lycopersicum	58.85	1.00e-67	249.00
IUUC-Stu-112465	Solanum tuberosum	59.73	2.00e-68	251.00
IUUC-Sbi-114099	Sorghum bicolor	49.12	2.00e-26	112.00
IUUC-Tae-125846	Triticum aestivum	67.27	7.00e-21	94.00
IUUC-Vvi-131455	Vitis vinifera	63.94	3.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence