iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121106

Ensembl Protein ID

EOX93567

UniProt Accession

A0A061DMB3; A0A061DMB3_THECC

Genbank Protein ID

EOX93567.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001879

Gene Name

TCM_002456

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_002456	EOX93567	EOX93567

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	35.3	96	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  + +   l+CgH+fh+ Cl+kw     +++ + +CPlCr
   Q: 96   CSVCLTQFepESEINRLSCGHLFHKVCLEKW-----LKYWNVTCPLCR 138
           ********4422255588*************.....89*********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGLSSLPAPS EGVLCILLVN TALSISIVKG IIRSILHIVG IHLSSSSSAS DSVENPSESF 60
DFHLSTSDSY IDEFRSRTPA IRFDAVCSCK RPEHDCSVCL TQFEPESEIN RLSCGHLFHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCATTTC TCTTACAACC CCAGTTTCCT TTCTCTATGC TTCATTAATC CCATGCAAAA 60
AAAATCGTGC TTATTTCTTG TTCTTGATAC CTTTACAGAG CAAAGTTCAC CATTTTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0009687--P:abscisic acid metabolic process
GO:0010200--P:response to chitin
GO:0009739--P:response to gibberellin
GO:0009651--P:response to salt stress

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	47.89	2.00e-30	124.00
IUUC-Aly-005890	Arabidopsis lyrata	65.54	4.00e-46	176.00
IUUC-Ath-006955	Arabidopsis thaliana	62.34	3.00e-46	176.00
IUUC-Ani-009448	Aspergillus nidulans	44.90	2.00e-09	53.50
IUUC-Bdi-014109	Brachypodium distachyon	38.93	5.00e-20	89.40
IUUC-Bol-015727	Brassica oleracea	61.64	2.00e-48	184.00
IUUC-Bra-017460	Brassica rapa	60.96	4.00e-49	185.00
IUUC-Gma-043655	Glycine max	79.22	4.00e-64	235.00
IUUC-Hvu-047116	Hordeum vulgare	60.00	2.00e-14	70.50
IUUC-Lpe-051313	Leersia perrieri	41.26	5.00e-24	102.00
IUUC-Mtr-058124	Medicago truncatula	73.55	5.00e-59	218.00
IUUC-Mac-064673	Musa acuminata	52.45	8.00e-29	118.00
IUUC-Oba-075151	Oryza barthii	64.44	1.00e-13	68.20
IUUC-Ogl-077775	Oryza glaberrima	42.47	4.00e-21	92.80
IUUC-Ogu-078543	Oryza glumaepatula	62.50	7.00e-12	62.40
IUUC-Oin-079546	Oryza indica	42.47	4.00e-21	92.80
IUUC-Ome-081545	Oryza meridionalis	40.69	2.00e-22	97.40
IUUC-Oni-082196	Oryza nivara	42.47	4.00e-21	92.80
IUUC-Opu-083519	Oryza punctata	41.45	8.00e-23	98.60
IUUC-Oru-084312	Oryza rufipogon	70.83	1.00e-16	78.60
IUUC-Osa-086234	Oryza sativa	42.47	4.00e-21	92.80
IUUC-Pop-099448	Populus trichocarpa	78.43	9.00e-65	238.00
IUUC-Ppe-101936	Prunus persica	72.67	8.00e-59	218.00
IUUC-Sit-110820	Setaria italica	65.71	3.00e-10	57.00
IUUC-Sly-111064	Solanum lycopersicum	58.26	7.00e-36	141.00
IUUC-Stu-112418	Solanum tuberosum	56.16	6.00e-44	168.00
IUUC-Sbi-113942	Sorghum bicolor	38.67	2.00e-23	100.00
IUUC-Tae-123732	Triticum aestivum	63.27	3.00e-15	74.70
IUUC-Vvi-131394	Vitis vinifera	76.16	1.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence