iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114189

UUCD1 version

UUC-SoB-00062

Ensembl Protein ID

Sb06g025670.1

UniProt Accession

A0A1B6PMN0; A0A1B6PMN0_SORBI

Genbank Protein ID

KXG26922.1; KXG26923.1; KXG26924.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765; CM000765; CM000765

Gene Name

SORBI_006G182200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g025670	Sb06g025670.1	Sb06g025670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-44	146.2	322	359
UBD/Beta-Prp	8.50e-66	222.9	59	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H ++vt+la+  s+++++sG+ Dg++++WD  +g++ +
   Q: 322  HDEGVTSLAWlgSSRYVASGCIDGKVRIWDSLSGDCAR 359
           9999*******866****************99999975 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
           + ++t++gh+d+v +++ sp++ + ++sG++d+   +w + +++     l+gh+++v  v++++dgnll+sGs D+++++W+ +t +l  tl+g  
   Q: 59   DSTYTFQGHKDEVFTVACSPTDaSLVASGGKDDRGFLWRIGSQEGAL-ELTGHKDTVGAVAFSSDGNLLASGSFDGQINVWNTATRTLKGTLEG-S 152
           5789****************7769999*****************999.9********************************************9.* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
            +  ++l++++ g  +++gs+d  v +w+  ++ +++t+ gh+++v++ +f+p+++++ +gs+D s+riWd rs +  +++ +h
   Q: 153  GSGFEWLKWHPRGHLIIAGSEDCNVWMWNADHNAILNTFAGHSNTVTCGDFTPDGKLICTGSDDASLRIWDPRSAQSRHVVRGH 236
           ****************************************************************************99998876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSISGELRGE GGSDGEEEVF INEEDIIHEI TIDDEDLPDR DEEDDDVGDG MVDSEDVDDS 60
TYTFQGHKDE VFTVACSPTD ASLVASGGKD DRGFLWRIGS QEGALELTGH KDTVGAVAFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCTAAAC AAGGCCTAAA TTGGCCTTGC CCGCACGCCT CTTGGCCCAC GGCCTGGACT 60
CGTCTCGCCC GCGGCGATCT CCTCCGTCCG CTCGCCGCGC CGCAACCCGG GAGACTGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	80.30	3.00e-159	554.00
IUUC-Aml-001781	Ailuropoda melanoleuca	33.43	9.00e-59	219.00
IUUC-Atr-003169	Amborella trichopoda	58.02	1.00e-127	448.00
IUUC-Aca-004594	Anolis carolinensis	33.71	5.00e-56	210.00
IUUC-Aly-006277	Arabidopsis lyrata	53.20	3.00e-109	387.00
IUUC-Ath-007701	Arabidopsis thaliana	57.02	2.00e-120	424.00
IUUC-Ame-011651	Astyanax mexicanus	29.94	1.00e-48	186.00
IUUC-Bta-012833	Bos taurus	33.43	8.00e-58	216.00
IUUC-Bdi-014831	Brachypodium distachyon	81.18	7.00e-163	565.00
IUUC-Bol-015313	Brassica oleracea	55.21	3.00e-120	424.00
IUUC-Bra-017115	Brassica rapa	53.14	3.00e-106	377.00
IUUC-Cel-018305	Caenorhabditis elegans	27.23	6.00e-34	137.00
IUUC-Cja-019433	Callithrix jacchus	33.43	7.00e-58	217.00
IUUC-Cfa-020093	Canis familiaris	33.43	3.00e-59	221.00
IUUC-Cpo-021742	Cavia porcellus	33.43	4.00e-58	217.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	40.40	1.00e-72	265.00
IUUC-Csa-023498	Chlorocebus sabaeus	33.43	3.00e-58	218.00
IUUC-Cho-024628	Choloepus hoffmanni	33.57	2.00e-44	172.00
IUUC-Cin-025244	Ciona intestinalis	31.44	1.00e-49	189.00
IUUC-Csv-026218	Ciona savignyi	32.27	5.00e-49	187.00
IUUC-Cne-026911	Cryptococcus neoformans	27.84	8.00e-36	144.00
IUUC-Dre-028528	Danio rerio	35.94	3.00e-57	214.00
IUUC-Dno-029297	Dasypus novemcinctus	33.43	7.00e-58	217.00
IUUC-Ete-033100	Echinops telfairi	36.32	4.00e-39	154.00
IUUC-Eca-034277	Equus caballus	33.43	6.00e-58	217.00
IUUC-Fca-036115	Felis catus	33.43	4.00e-59	221.00
IUUC-Fal-036864	Ficedula albicollis	35.13	2.00e-62	231.00
IUUC-Gmo-039090	Gadus morhua	33.09	7.00e-40	156.00
IUUC-Gga-040545	Gallus gallus	35.13	2.00e-62	232.00
IUUC-Gac-042027	Gasterosteus aculeatus	36.55	3.00e-63	234.00
IUUC-Gma-044168	Glycine max	54.97	4.00e-120	423.00
IUUC-Ggo-045036	Gorilla gorilla	33.43	6.00e-58	217.00
IUUC-Hsa-046749	Homo sapiens	33.43	6.00e-58	217.00
IUUC-Hvu-047217	Hordeum vulgare	76.94	5.00e-168	582.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	33.43	3.00e-58	218.00
IUUC-Lch-049747	Latimeria chalumnae	31.77	2.00e-46	179.00
IUUC-Lpe-051433	Leersia perrieri	82.03	2.00e-165	574.00
IUUC-Loc-052406	Lepisosteus oculatus	37.93	2.00e-64	238.00
IUUC-Laf-053901	Loxodonta africana	33.43	7.00e-58	216.00
IUUC-Mcc-054990	Macaca mulatta	33.43	7.00e-58	217.00
IUUC-Meu-056844	Macropus eugenii	34.00	5.00e-57	214.00
IUUC-Mtr-057759	Medicago truncatula	56.29	2.00e-107	381.00
IUUC-Mla-058856	Melampsora laricipopulina	29.41	5.00e-41	160.00
IUUC-Mga-059749	Meleagris gallopavo	34.84	1.00e-61	229.00
IUUC-Mvi-060237	Microbotryum violaceum	32.49	1.00e-52	199.00
IUUC-Mmr-061270	Microcebus murinus	32.16	7.00e-55	207.00
IUUC-Mdo-062965	Monodelphis domestica	33.43	4.00e-58	218.00
IUUC-Mmu-064081	Mus musculus	33.71	1.00e-58	219.00
IUUC-Mac-065236	Musa acuminata	67.27	1.00e-139	488.00
IUUC-Mpu-066355	Mustela putorius furo	33.43	4.00e-59	221.00
IUUC-Mlu-067630	Myotis lucifugus	32.77	1.00e-55	209.00
IUUC-Nle-069701	Nomascus leucogenys	33.43	5.00e-58	217.00
IUUC-Opr-070337	Ochotona princeps	30.59	3.00e-49	188.00
IUUC-Ont-072614	Oreochromis niloticus	33.92	1.00e-58	219.00
IUUC-Ocu-073912	Oryctolagus cuniculus	33.43	7.00e-58	217.00
IUUC-Oba-075195	Oryza barthii	85.63	4.00e-166	576.00
IUUC-Obr-076059	Oryza brachyantha	82.30	8.00e-169	585.00
IUUC-Ogl-077318	Oryza glaberrima	84.37	6.00e-171	592.00
IUUC-Ogu-078579	Oryza glumaepatula	85.15	1.00e-167	581.00
IUUC-Oin-079340	Oryza indica	84.37	6.00e-171	592.00
IUUC-Olo-080813	Oryza longistaminata	86.06	2.00e-168	583.00
IUUC-Ome-081420	Oryza meridionalis	85.63	9.00e-166	575.00
IUUC-Oni-082650	Oryza nivara	85.63	4.00e-166	576.00
IUUC-Opu-083832	Oryza punctata	85.32	9.00e-166	575.00
IUUC-Oru-084207	Oryza rufipogon	85.63	4.00e-166	576.00
IUUC-Osa-085708	Oryza sativa	84.37	6.00e-171	592.00
IUUC-Ola-087164	Oryzias latipes	34.69	4.00e-58	217.00
IUUC-Olu-087824	Ostreococcus lucimarinus	40.88	2.00e-63	235.00
IUUC-Oga-088864	Otolemur garnettii	33.43	4.00e-58	218.00
IUUC-Oar-090115	Ovis aries	33.14	2.00e-57	215.00
IUUC-Ptr-091398	Pan troglodytes	33.43	5.00e-58	217.00
IUUC-Pan-092002	Papio anubis	33.43	6.00e-58	217.00
IUUC-Psi-093979	Pelodiscus sinensis	38.55	3.00e-32	130.00
IUUC-Pma-094618	Petromyzon marinus	32.96	5.00e-53	200.00
IUUC-Ppa-095351	Physcomitrella patens	53.12	1.00e-111	395.00
IUUC-Pfo-097078	Poecilia formosa	35.38	1.00e-59	222.00
IUUC-Pab-098540	Pongo abelii	33.43	5.00e-58	217.00
IUUC-Pop-099761	Populus trichocarpa	63.72	2.00e-127	447.00
IUUC-Pca-101072	Procavia capensis	32.64	2.00e-53	202.00
IUUC-Ppe-101979	Prunus persica	58.41	6.00e-125	439.00
IUUC-Pva-102400	Pteropus vampyrus	29.18	4.00e-45	174.00
IUUC-Pgr-103362	Puccinia graminis	29.33	6.00e-43	167.00
IUUC-Ptt-103756	Puccinia triticina	33.47	5.00e-33	134.00
IUUC-Rno-105672	Rattus norvegicus	33.43	3.00e-58	218.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	31.12	2.00e-48	185.00
IUUC-Spo-108208	Schizosaccharomyces pombe	31.12	8.00e-52	196.00
IUUC-Smo-109093	Selaginella moellendorffii	48.09	4.00e-95	340.00
IUUC-Sit-109978	Setaria italica	92.63	0.00e+00	640.00
IUUC-Sly-111316	Solanum lycopersicum	63.64	2.00e-132	464.00
IUUC-Stu-111956	Solanum tuberosum	62.76	6.00e-131	459.00
IUUC-Sre-115029	Sporisorium reilianum	36.18	4.00e-55	207.00
IUUC-Ssc-115726	Sus scrofa	36.49	9.00e-42	162.00
IUUC-Tgu-117514	Taeniopygia guttata	35.13	5.00e-63	234.00
IUUC-Tru-117851	Takifugu rubripes	33.52	9.00e-59	219.00
IUUC-Tsy-119140	Tarsius syrichta	31.74	7.00e-51	193.00
IUUC-Tni-120248	Tetraodon nigroviridis	34.71	2.00e-59	221.00
IUUC-Tca-121686	Theobroma cacao	56.98	2.00e-119	421.00
IUUC-Tae-125689	Triticum aestivum	80.88	1.00e-163	568.00
IUUC-Tur-126174	Triticum urartu	73.68	4.00e-158	549.00
IUUC-Ttr-128182	Tursiops truncatus	33.43	1.00e-57	216.00
IUUC-Uma-129624	Ustilago maydis	34.80	2.00e-53	202.00
IUUC-Vpa-130605	Vicugna pacos	31.96	5.00e-45	174.00
IUUC-Vvi-131319	Vitis vinifera	61.58	2.00e-135	474.00
IUUC-Xtr-132193	Xenopus tropicalis	36.00	3.00e-64	238.00
IUUC-Xma-133880	Xiphophorus maculatus	35.38	1.00e-59	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence