iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081714

Ensembl Protein ID

OMERI05G17820.1

UniProt Accession

A0A0E0DSX9; A0A0E0DSX9_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI05G17820	OMERI05G17820.1	OMERI05G17820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-08	36.2	142	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +++Ce+C++wfHp C ++++++ ++ ++ ++C++C++
   Q: 142  FC-KCEMPYNPDDLMIQCEECSDWFHPSCIGMTIKDAKKLEH-FFCQSCTA 190
           78.7999**************************888888876.******86 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MAKSRPPKRI LESYTIKGSD KVIKPGDCVL MRASDTSKPP YVARVEAIEA AGSRGTNVRV 60
RVRWYYRPEE SMGGRRPFHG AKEVFLSDHY DVQSADTIEG KCNVHSFRSY TKLDSVNAED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGGAAG CGAAGAAATC CGTGGTATTT ATATTTTCGA GACCCGAAAA GAAAAACCAC 60
GAATTCCCAA TAAAGAAATA GGCAAAATTC CACATCTCCT CGTCTCCTCC TCCCAGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005443	Arabidopsis lyrata	65.89	6.00e-85	305.00
IUUC-Bdi-015071	Brachypodium distachyon	92.69	1.00e-120	424.00
IUUC-Bol-015574	Brassica oleracea	67.29	7.00e-89	318.00
IUUC-Bra-017900	Brassica rapa	67.76	7.00e-89	319.00
IUUC-Cel-018283	Caenorhabditis elegans	30.00	3.00e-09	58.20
IUUC-Cre-022934	Chlamydomonas reinhardtii	47.31	7.00e-47	179.00
IUUC-Gma-042998	Glycine max	68.66	1.00e-93	334.00
IUUC-Hvu-047723	Hordeum vulgare	77.98	1.00e-100	357.00
IUUC-Lpe-051138	Leersia perrieri	98.09	9.00e-124	434.00
IUUC-Mtr-058621	Medicago truncatula	69.41	2.00e-92	330.00
IUUC-Oba-075855	Oryza barthii	99.05	2.00e-125	440.00
IUUC-Obr-076353	Oryza brachyantha	81.10	6.00e-119	421.00
IUUC-Ogl-077547	Oryza glaberrima	95.63	4.00e-116	409.00
IUUC-Ogu-078224	Oryza glumaepatula	78.90	9.00e-103	364.00
IUUC-Oin-079179	Oryza indica	99.54	1.00e-128	450.00
IUUC-Olo-080461	Oryza longistaminata	97.37	1.00e-111	394.00
IUUC-Oni-082099	Oryza nivara	100.00	2.00e-127	447.00
IUUC-Opu-083906	Oryza punctata	79.36	3.00e-103	366.00
IUUC-Oru-085087	Oryza rufipogon	78.90	3.00e-103	366.00
IUUC-Osa-085620	Oryza sativa	99.54	1.00e-128	450.00
IUUC-Pop-098853	Populus trichocarpa	70.05	2.00e-93	333.00
IUUC-Pca-100779	Procavia capensis	29.46	4.00e-11	63.20
IUUC-Sit-110445	Setaria italica	95.41	2.00e-124	437.00
IUUC-Sly-110932	Solanum lycopersicum	68.20	3.00e-92	330.00
IUUC-Stu-112357	Solanum tuberosum	68.20	2.00e-90	323.00
IUUC-Sbi-113989	Sorghum bicolor	96.33	2.00e-125	440.00
IUUC-Sre-115140	Sporisorium reilianum	60.00	1.00e-09	58.20
IUUC-Tca-121689	Theobroma cacao	70.00	1.00e-90	325.00
IUUC-Tae-123050	Triticum aestivum	91.74	8.00e-121	424.00
IUUC-Uma-129425	Ustilago maydis	46.81	2.00e-07	51.20
IUUC-Vvi-131074	Vitis vinifera	70.51	2.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence