iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058188

Ensembl Protein ID

KEH36058

UniProt Accession

A0A072V3W4; A0A072V3W4_MEDTR

Genbank Protein ID

KEH36058.1

Protein Name

RING-H2 finger protein ATL4J

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g110190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g110190	KEH36058	KEH36058

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.9	92	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ f+d+  +++lp C+H+fh +C+ kw         + +CPlCr
   Q: 92   CTVCLSKFEDEeiLRLLPkCKHAFHMNCIDKW------LESHSTCPLCR 134
           9*******88777999999*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAELPKGVTP SKGVVIIVLS IMFFLTFILL VYVKFCRVTP IHLLNPNSLN LQNNLGQTRS 60
RSINSGVEQK VIETLPFFKF SSLKGSKQGL ECTVCLSKFE DEEILRLLPK CKHAFHMNCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAGT TACCAAAAGG TGTTACTCCA AGTAAAGGTG TTGTAATAAT AGTACTTTCC 60
ATAATGTTTT TCCTAACTTT TATCTTACTT GTATATGTCA AATTCTGTCG TGTTACTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g110190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002180	Ailuropoda melanoleuca	40.66	2.00e-16	79.30
IUUC-Apl-003246	Anas platyrhynchos	39.56	2.00e-16	79.70
IUUC-Ame-011569	Astyanax mexicanus	41.76	3.00e-17	82.00
IUUC-Bta-012401	Bos taurus	39.56	3.00e-16	79.00
IUUC-Cja-018848	Callithrix jacchus	39.56	3.00e-16	79.30
IUUC-Cfa-020959	Canis familiaris	40.66	2.00e-16	79.30
IUUC-Csa-024265	Chlorocebus sabaeus	40.66	2.00e-16	79.30
IUUC-Dre-028483	Danio rerio	40.66	2.00e-16	79.70
IUUC-Dor-030261	Dipodomys ordii	39.56	2.00e-16	79.70
IUUC-Eca-034105	Equus caballus	40.66	2.00e-16	79.30
IUUC-Fca-036484	Felis catus	39.56	3.00e-16	79.30
IUUC-Fal-037494	Ficedula albicollis	40.66	1.00e-16	80.10
IUUC-Gmo-039153	Gadus morhua	40.66	3.00e-16	79.00
IUUC-Gga-040521	Gallus gallus	40.66	1.00e-16	80.10
IUUC-Gma-043723	Glycine max	59.22	6.00e-107	380.00
IUUC-Ggo-044571	Gorilla gorilla	39.56	3.00e-16	79.00
IUUC-Hsa-046118	Homo sapiens	39.56	3.00e-16	79.00
IUUC-Hvu-047489	Hordeum vulgare	34.34	5.00e-42	164.00
IUUC-Lch-050227	Latimeria chalumnae	40.66	1.00e-16	80.10
IUUC-Lpe-051018	Leersia perrieri	31.59	7.00e-43	167.00
IUUC-Loc-052302	Lepisosteus oculatus	40.66	1.00e-16	80.10
IUUC-Laf-054381	Loxodonta africana	39.56	3.00e-16	79.00
IUUC-Mcc-055576	Macaca mulatta	39.56	3.00e-16	79.00
IUUC-Meu-056404	Macropus eugenii	40.66	1.00e-16	80.10
IUUC-Mga-059597	Meleagris gallopavo	38.46	4.00e-15	75.10
IUUC-Mmr-061247	Microcebus murinus	39.56	3.00e-16	79.30
IUUC-Mdo-061822	Monodelphis domestica	39.56	3.00e-16	79.00
IUUC-Mmu-064200	Mus musculus	39.56	3.00e-16	79.00
IUUC-Mac-064701	Musa acuminata	43.45	3.00e-66	244.00
IUUC-Mpu-066508	Mustela putorius furo	40.66	2.00e-16	79.70
IUUC-Mlu-067948	Myotis lucifugus	39.56	2.00e-16	79.70
IUUC-Ont-072090	Oreochromis niloticus	41.49	1.00e-16	80.50
IUUC-Ocu-074801	Oryctolagus cuniculus	40.66	1.00e-16	80.10
IUUC-Obr-076167	Oryza brachyantha	35.00	3.00e-31	128.00
IUUC-Ome-081414	Oryza meridionalis	33.71	9.00e-39	153.00
IUUC-Opu-084088	Oryza punctata	33.97	2.00e-49	188.00
IUUC-Ola-086948	Oryzias latipes	41.49	1.00e-16	80.50
IUUC-Oga-087997	Otolemur garnettii	39.56	3.00e-16	79.30
IUUC-Oar-089245	Ovis aries	40.43	3.00e-17	82.00
IUUC-Ptr-091566	Pan troglodytes	39.56	3.00e-16	79.00
IUUC-Pan-091884	Papio anubis	39.56	3.00e-16	79.30
IUUC-Psi-093539	Pelodiscus sinensis	39.56	3.00e-16	79.00
IUUC-Pfo-097300	Poecilia formosa	40.66	3.00e-16	79.30
IUUC-Pab-098694	Pongo abelii	39.56	3.00e-16	79.00
IUUC-Pop-099143	Populus trichocarpa	45.25	2.00e-75	275.00
IUUC-Pca-100704	Procavia capensis	42.86	2.00e-16	79.70
IUUC-Rno-105006	Rattus norvegicus	39.56	3.00e-16	79.00
IUUC-Sha-107023	Sarcophilus harrisii	40.66	1.00e-16	80.50
IUUC-Smo-109603	Selaginella moellendorffii	74.07	3.00e-23	99.00
IUUC-Sit-110634	Setaria italica	33.33	5.00e-52	197.00
IUUC-Sar-112966	Sorex araneus	39.56	3.00e-16	79.30
IUUC-Ssc-115502	Sus scrofa	39.56	3.00e-16	79.30
IUUC-Tgu-117430	Taeniopygia guttata	40.66	2.00e-16	80.10
IUUC-Tru-118715	Takifugu rubripes	41.11	6.00e-17	81.30
IUUC-Tni-120282	Tetraodon nigroviridis	41.11	5.00e-17	81.60
IUUC-Tbe-127237	Tupaia belangeri	39.56	4.00e-16	79.00
IUUC-Ttr-128179	Tursiops truncatus	40.66	3.00e-16	79.00
IUUC-Vpa-130240	Vicugna pacos	39.56	5.00e-16	78.60
IUUC-Xtr-132852	Xenopus tropicalis	41.30	2.00e-17	83.20
IUUC-Xma-133465	Xiphophorus maculatus	41.49	1.00e-16	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence