iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014418

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100826661; BRADI_3g56317

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G56317	BRADI3G56317.1	BRADI3G56317.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-21	75.7	172	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f Cp+++e+M++Pv+++ G+tydr++Ie+++++        +cPvt+ pl+++ ++ n +l+++i +w  +n+
   Q: 172  LYDAFFCPLTKEVMTEPVTTEGGVTYDRRAIEEHFERFTGssepvSCPVTKMPLQSKAVMSNASLKSVIAEWTMRNE 248
           5899*******************************5554445889***************************98886 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MLSVPLSTAN VSEEKSMESG RAMMERQTAR RAPTNMTQMP ESLFASVILA KDLTARCRGR 60
SLQLTDDAIQ SITQDLENVI QNICDHLGRI PASAFGSNAC TDGAIRSHSM MSYFGVDMPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGTCGG TGCCACTATC CACTGCCAAT GTTAGCGAAG AGAAATCCAT GGAGTCAGGT 60
AGGGCCATGA TGGAGCGTCA AACTGCTCGC AGGGCCCCAA CCAATATGAC ACAGATGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100826661

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	78.02	0.00e+00	1444.00
IUUC-Hvu-047634	Hordeum vulgare	80.19	0.00e+00	1453.00
IUUC-Lpe-051636	Leersia perrieri	72.03	0.00e+00	1237.00
IUUC-Oba-075656	Oryza barthii	74.72	0.00e+00	1357.00
IUUC-Obr-076391	Oryza brachyantha	72.54	0.00e+00	1306.00
IUUC-Ogl-077675	Oryza glaberrima	74.72	0.00e+00	1357.00
IUUC-Ogu-078313	Oryza glumaepatula	74.92	0.00e+00	1360.00
IUUC-Oin-079739	Oryza indica	74.51	0.00e+00	1369.00
IUUC-Olo-080998	Oryza longistaminata	74.10	0.00e+00	1382.00
IUUC-Ome-082000	Oryza meridionalis	74.48	0.00e+00	1371.00
IUUC-Oni-082054	Oryza nivara	69.68	0.00e+00	1318.00
IUUC-Opu-083582	Oryza punctata	74.28	0.00e+00	1359.00
IUUC-Oru-084523	Oryza rufipogon	74.61	0.00e+00	1338.00
IUUC-Osa-086199	Oryza sativa	74.61	0.00e+00	1339.00
IUUC-Sit-110498	Setaria italica	74.87	0.00e+00	1310.00
IUUC-Sbi-114808	Sorghum bicolor	74.25	0.00e+00	1366.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence