iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017617

Ensembl Protein ID

Bra004351.1-P

UniProt Accession

M4CJG7; M4CJG7_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004351	Bra004351.1	Bra004351.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-21	76.5	240	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++++M+dPv++++G+t +r+++ +w+++ g     +cPvt+q+l  + l Pnl+l+ +i +w  +n+
   Q: 240  PYQAFICPLTKDVMEDPVTTETGVTCERQAVTEWFDKFGDpdeiSCPVTGQKL-TTGLSPNLVLKTIIGEWKVRNE 314
           5799*******************************999999999*********.789**************99986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEIQTGESSI TCPTDVVESL SESIEAAKYL LEITQESNGP EPTTDLTSIE AGLQGVVKHI 60
GETLQSIPEA IIDEEEYIGV VVQSLSNEMQ NANVGDGSKS EILHNIQQKI SQRHSHEELV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATAC AGACGGGAGA GAGTTCCATC ACATGTCCAA CGGATGTGGT TGAATCACTA 60
TCCGAGAGTA TAGAAGCAGC CAAGTATCTC CTCGAGATAA CTCAAGAAAG CAACGGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	40.05	1.00e-178	620.00
IUUC-Atr-002664	Amborella trichopoda	45.76	6.00e-178	617.00
IUUC-Aly-006424	Arabidopsis lyrata	84.38	0.00e+00	1724.00
IUUC-Ath-006596	Arabidopsis thaliana	83.15	0.00e+00	1622.00
IUUC-Bdi-014572	Brachypodium distachyon	45.13	0.00e+00	655.00
IUUC-Bol-016179	Brassica oleracea	93.67	0.00e+00	1964.00
IUUC-Hvu-047634	Hordeum vulgare	43.65	6.00e-179	620.00
IUUC-Lpe-050817	Leersia perrieri	42.58	0.00e+00	651.00
IUUC-Mvi-060551	Microbotryum violaceum	33.33	1.20e+00	29.60
IUUC-Mac-065538	Musa acuminata	45.96	0.00e+00	645.00
IUUC-Oba-075004	Oryza barthii	43.77	0.00e+00	659.00
IUUC-Obr-076391	Oryza brachyantha	42.38	5.00e-166	578.00
IUUC-Ogl-077375	Oryza glaberrima	43.77	0.00e+00	659.00
IUUC-Ogu-078488	Oryza glumaepatula	43.89	0.00e+00	663.00
IUUC-Oin-079369	Oryza indica	43.85	0.00e+00	662.00
IUUC-Olo-080998	Oryza longistaminata	42.89	0.00e+00	627.00
IUUC-Ome-081243	Oryza meridionalis	43.53	0.00e+00	654.00
IUUC-Oni-082268	Oryza nivara	44.01	0.00e+00	663.00
IUUC-Opu-083388	Oryza punctata	43.86	0.00e+00	687.00
IUUC-Oru-084387	Oryza rufipogon	43.77	0.00e+00	662.00
IUUC-Osa-086255	Oryza sativa	43.85	0.00e+00	662.00
IUUC-Pop-099505	Populus trichocarpa	57.57	0.00e+00	891.00
IUUC-Ppe-101776	Prunus persica	50.93	0.00e+00	927.00
IUUC-Sit-110322	Setaria italica	44.38	0.00e+00	628.00
IUUC-Sly-111047	Solanum lycopersicum	46.61	0.00e+00	856.00
IUUC-Stu-112113	Solanum tuberosum	46.36	0.00e+00	850.00
IUUC-Sbi-113818	Sorghum bicolor	43.17	2.00e-180	625.00
IUUC-Tca-121365	Theobroma cacao	54.43	0.00e+00	1006.00
IUUC-Tae-124087	Triticum aestivum	43.87	3.00e-176	612.00
IUUC-Tur-126161	Triticum urartu	43.63	8.00e-175	607.00
IUUC-Vvi-131502	Vitis vinifera	57.12	0.00e+00	892.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence