iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110498

Ensembl Protein ID

Si016226m

UniProt Accession

K3YPN4; K3YPN4_SETIT

Genbank Protein ID

KQL31316.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101780036; SETIT_016226mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si016226m.g	Si016226m	Si016226m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-20	73.1	170	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f Cp+++e+M+dPv+++sG+t dr++Ie+++++         cPvt+ p+++++++ n +l+++i++w  +n+
   Q: 170  LYDAFFCPLTNEIMTDPVTIESGVTCDRRAIEEYIERFSVssepvYCPVTKMPMQSKTVMSNASLKSVIEEWTMRNE 246
           5899*******************************5555445678***************************98886 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MLSVATINVS QENSMESVRA TMERQTARRT QTDATQMIES LFASVNLAKD LSERCKGRAL 60
QLKGDEIQNI AQDLENTLQN IYDDLGRIPA SAFGSNAYMN VLIKSQSMRG YSEADISMNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGTCAG TAGCTACCAT CAATGTCAGC CAAGAGAACT CCATGGAATC AGTCAGGGCA 60
ACAATGGAGC GTCAAACAGC TCGCAGGACC CAGACTGATG CGACACAGAT GATAGAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101780036

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	71.33	0.00e+00	1315.00
IUUC-Aly-006424	Arabidopsis lyrata	44.55	0.00e+00	676.00
IUUC-Bdi-014418	Brachypodium distachyon	75.57	0.00e+00	1371.00
IUUC-Hvu-047634	Hordeum vulgare	72.91	0.00e+00	1337.00
IUUC-Lpe-051636	Leersia perrieri	71.27	0.00e+00	1224.00
IUUC-Oba-075656	Oryza barthii	73.79	0.00e+00	1316.00
IUUC-Obr-076391	Oryza brachyantha	71.44	0.00e+00	1294.00
IUUC-Ogl-077675	Oryza glaberrima	73.79	0.00e+00	1316.00
IUUC-Ogu-078313	Oryza glumaepatula	74.00	0.00e+00	1319.00
IUUC-Oin-079739	Oryza indica	73.38	0.00e+00	1325.00
IUUC-Olo-080998	Oryza longistaminata	73.69	0.00e+00	1355.00
IUUC-Ome-082000	Oryza meridionalis	73.97	0.00e+00	1331.00
IUUC-Oni-082054	Oryza nivara	68.72	0.00e+00	1273.00
IUUC-Opu-083582	Oryza punctata	72.94	0.00e+00	1308.00
IUUC-Oru-084523	Oryza rufipogon	73.69	0.00e+00	1285.00
IUUC-Osa-086199	Oryza sativa	73.69	0.00e+00	1286.00
IUUC-Sbi-114808	Sorghum bicolor	89.04	0.00e+00	1646.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence