iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014833

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000881

Gene Name

LOC100844054; BRADI_2g53650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G53650	BRADI2G53650.1	BRADI2G53650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-31	107.2	282	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++++CpIsl+lMrdPvv++sG+tydr+sI +w+ sg++tcP+t+q l++ +lvPn++l++li++wc en++
   Q: 282  PPPDLRCPISLDLMRDPVVAASGQTYDRESIGRWFGSGKSTCPKTGQVLANLELVPNKSLKNLISKWCRENGV 354
           699*******************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAANDPRAVV TTAPSSSGSY SSAFLPPPSP SDGDLLRSLH RLARDLSAVE TPAPFLRAAF 60
ASISRRSKLL AAAFDDLLLC AAAAGDGLPR SASLCLREVL LVLQRFKAVV ADCGARSRMR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATTCCCGT CCGGTTGTTC CGCTAAACCA AACCAGTGGG CACCCTCTTC TTTAGCCTCG 60
AGTTGCTGCT GGCGCCGATG GCTGCTAATG ACCCGAGAGC GGTGGTAACC ACCGCGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100844054

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	90.35	7.00e-148	516.00
IUUC-Atr-002566	Amborella trichopoda	42.01	3.00e-107	382.00
IUUC-Gma-043531	Glycine max	42.11	6.00e-106	377.00
IUUC-Hvu-047253	Hordeum vulgare	89.26	0.00e+00	744.00
IUUC-Lpe-051702	Leersia perrieri	84.55	0.00e+00	844.00
IUUC-Mac-065033	Musa acuminata	53.14	5.00e-144	504.00
IUUC-Oba-075156	Oryza barthii	80.46	0.00e+00	880.00
IUUC-Obr-076747	Oryza brachyantha	85.58	0.00e+00	722.00
IUUC-Ogl-076933	Oryza glaberrima	85.74	0.00e+00	891.00
IUUC-Ogu-077964	Oryza glumaepatula	85.58	0.00e+00	888.00
IUUC-Oin-079937	Oryza indica	85.74	0.00e+00	890.00
IUUC-Oni-082444	Oryza nivara	85.74	0.00e+00	890.00
IUUC-Opu-083588	Oryza punctata	85.20	0.00e+00	908.00
IUUC-Oru-084945	Oryza rufipogon	85.58	0.00e+00	887.00
IUUC-Osa-085986	Oryza sativa	85.58	0.00e+00	887.00
IUUC-Pop-099292	Populus trichocarpa	45.90	8.00e-144	503.00
IUUC-Ppe-101643	Prunus persica	46.39	2.00e-142	498.00
IUUC-Sit-110652	Setaria italica	82.95	0.00e+00	881.00
IUUC-Sbi-114567	Sorghum bicolor	79.52	0.00e+00	864.00
IUUC-Tca-121203	Theobroma cacao	47.10	3.00e-143	501.00
IUUC-Tae-123409	Triticum aestivum	89.06	0.00e+00	853.00
IUUC-Vvi-131545	Vitis vinifera	45.12	8.00e-128	450.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence