iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPTM	UniProt
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/MUB	MUB	25320573

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.60e-12	47.3	8	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsdtVaeLKeki.....ekklgip..peqqrLiykGkiLeddktLady 59
           ++++++ +dg+ +++ k+n s+tV+ LKek+     ++k+++p  +++++Li++GkiLe+++tLa+ 
   Q: 8    IELKFRLADGTdIGPSKYNQSMTVSSLKEKLisqwpKDKENTPktVNDMKLINAGKILENNRTLAES 74
           6799********************************99999998888*****************986 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Ubiquitous.

Protein Sequence
(Fasta)

MAGEEDWIEL KFRLADGTDI GPSKYNQSMT VSSLKEKLIS QWPKDKENTP KTVNDMKLIN 60
AGKILENNRT LAESRLPVCE LPGMIITMHI VLRLPTLDKK SEKLQNDPPM KNRCVCTIL 119

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTTTGTAA CCAAAACCAA AGTGTCTCTC TTTTCTTCTT CCTAAATTTC TTTCCACGAG 60
AATTGATTTG GGTTTGTGTT GTTTTTTTCT TTCTTTTTTG GGTTTTTGTA ATTGGGTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0488--Methylation
KW-0564--Palmitate
KW-0636--Prenylation
KW-1185--Reference proteome

Interpro

IPR017000--MUB
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

ath:AT1G22050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000266	Aegilops tauschii	62.38	3.00e-35	139.00
IUUC-Aly-005562	Arabidopsis lyrata	97.48	7.00e-66	241.00
IUUC-Bdi-014354	Brachypodium distachyon	65.55	8.00e-43	164.00
IUUC-Bol-016062	Brassica oleracea	91.60	1.00e-59	220.00
IUUC-Bra-017418	Brassica rapa	90.76	1.00e-59	220.00
IUUC-Fox-037943	Fusarium oxysporum	30.38	2.00e-04	38.90
IUUC-Fso-038159	Fusarium solani	30.38	2.00e-04	38.50
IUUC-Hvu-047190	Hordeum vulgare	63.87	2.00e-41	160.00
IUUC-Lpe-051406	Leersia perrieri	69.31	7.00e-38	147.00
IUUC-Mac-065001	Musa acuminata	67.52	2.00e-43	166.00
IUUC-Oba-075711	Oryza barthii	55.56	5.00e-38	152.00
IUUC-Obr-076210	Oryza brachyantha	68.07	8.00e-44	169.00
IUUC-Ogl-077494	Oryza glaberrima	54.62	2.00e-35	140.00
IUUC-Ogu-078501	Oryza glumaepatula	68.07	1.00e-42	167.00
IUUC-Oin-079722	Oryza indica	68.07	4.00e-44	168.00
IUUC-Olo-081013	Oryza longistaminata	55.56	1.00e-26	113.00
IUUC-Ome-081806	Oryza meridionalis	70.30	3.00e-37	149.00
IUUC-Oni-082423	Oryza nivara	68.07	9.00e-43	167.00
IUUC-Opu-083401	Oryza punctata	70.30	2.00e-37	149.00
IUUC-Oru-085116	Oryza rufipogon	68.07	1.00e-42	167.00
IUUC-Osa-085838	Oryza sativa	68.07	4.00e-44	168.00
IUUC-Ppa-096008	Physcomitrella patens	58.26	3.00e-38	149.00
IUUC-Ppe-101396	Prunus persica	70.59	1.00e-46	176.00
IUUC-Smo-109335	Selaginella moellendorffii	60.17	1.00e-41	160.00
IUUC-Sit-110538	Setaria italica	64.71	7.00e-43	164.00
IUUC-Sly-111844	Solanum lycopersicum	61.74	3.00e-37	146.00
IUUC-Stu-112320	Solanum tuberosum	64.35	1.00e-41	160.00
IUUC-Sbi-114838	Sorghum bicolor	65.55	3.00e-43	166.00
IUUC-Tca-121258	Theobroma cacao	74.79	7.00e-49	184.00
IUUC-Tae-124954	Triticum aestivum	61.34	7.00e-40	154.00
IUUC-Tur-126595	Triticum urartu	60.87	1.00e-37	147.00
IUUC-Vvi-131568	Vitis vinifera	73.95	3.00e-47	179.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence