iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095936

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545043

Gene Name

PHYPADRAFT_11930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S154_12V6	PP1S154_12V6.1	PP1S154_12V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-80	272.2	147	452

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl N gN+C+ N vLQcL+ +++l+ +ll+  ++++ ++n    + +++++lq+ ++++  ++++ +sp ++l+ ++++ +++   +q+Da+Ef
   Q: 147  CGLVNCGNSCFANVVLQCLTYTRPLTAYLLNDSHREVCRRN----DWCFMCELQSHVRKV-RETQNPFSPIRILSRIRSIGSHLGYGKQEDAHEF 236
           7******************************5555555543....68*************.9999****************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdc 190
           ++f +d++++++         +e++ +       +  ++ +++++li+++F+g+l+sq+kc ec+++s+r+e+++dl ++++g  e    sl+d+
   Q: 237  MRFAIDSMQSTC--------LDEFGGE-------KAVDPATQETTLIHHIFGGHLQSQVKCMECHHESNRYESMMDLAVEIHGVVE----SLEDA 312
           ************........3344444.......688999*******************************************996....8**** PP
   S: 191  LesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvv 285
           +++ft++e+l+g+nky+c++c+++++a k+l++++ P++L++ LkRf   ++ ++  k+nk+v+fp++Ld+sp+++ ++++   +  Y L+avvv
   Q: 313  IAQFTAAEMLDGDNKYKCDRCNAYVRAGKRLTVHEAPNILTIALKRF---QS-GKFGKLNKRVTFPKTLDMSPYMSGTNDD---SPLYGLYAVVV 400
           ***********************************************...33.4557********************6655...79********* PP
   S: 286  HsG..slss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           H    +      GHY++yvk+++g W+++dDskV+ev+ e+vl    ++aY+lfY+r
   Q: 401  HVDllN--AsffGHYICYVKDSNGVWYKIDDSKVKEVELEKVLA---QKAYMLFYTR 452
           **9543..3245********************************...********98 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MLGTSNCVVC QKSATPHRCS KCKSAKYCSS ECQKLHWRSG HRNECHVPVS SRPSGSGGES 60
VAVCNGKHPE TSKSGVSTTV LNPISLGIFK SDSNKSTSVK KSSPSQVAKI PGNALTKDGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAAGTCGAA GGCTGAAGAA GAGTCAGAGG ATCGCGGGCG ACGTTGGAGT CATTGTTCAG 60
AGAGAGGAGC AATTTGAAGC AGATCGCAAG TCGATGTTGG GCACAAGTAA CTGCGTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_11930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	64.62	3.00e-135	475.00
IUUC-Atr-002997	Amborella trichopoda	54.59	1.00e-143	503.00
IUUC-Aly-005863	Arabidopsis lyrata	53.49	4.00e-147	514.00
IUUC-Ath-007334	Arabidopsis thaliana	54.00	6.00e-149	520.00
IUUC-Bdi-014660	Brachypodium distachyon	52.03	2.00e-136	479.00
IUUC-Bol-016021	Brassica oleracea	55.36	2.00e-148	518.00
IUUC-Bra-018083	Brassica rapa	50.96	4.00e-142	497.00
IUUC-Hvu-047620	Hordeum vulgare	54.33	9.00e-146	510.00
IUUC-Lpe-051385	Leersia perrieri	51.12	1.00e-122	433.00
IUUC-Mtr-057748	Medicago truncatula	56.04	6.00e-150	524.00
IUUC-Mac-065096	Musa acuminata	69.77	2.00e-150	526.00
IUUC-Oba-075131	Oryza barthii	56.98	4.00e-138	484.00
IUUC-Obr-076763	Oryza brachyantha	56.67	1.00e-147	516.00
IUUC-Ogl-077264	Oryza glaberrima	56.21	2.00e-145	509.00
IUUC-Ogu-078646	Oryza glumaepatula	56.43	6.00e-146	511.00
IUUC-Oin-079613	Oryza indica	67.06	3.00e-138	485.00
IUUC-Olo-080250	Oryza longistaminata	56.43	2.00e-146	512.00
IUUC-Ome-081416	Oryza meridionalis	56.43	4.00e-146	511.00
IUUC-Oni-082102	Oryza nivara	56.21	6.00e-145	508.00
IUUC-Opu-083135	Oryza punctata	55.99	4.00e-145	508.00
IUUC-Oru-084644	Oryza rufipogon	56.43	6.00e-146	511.00
IUUC-Osa-086195	Oryza sativa	56.98	3.00e-140	491.00
IUUC-Olu-087767	Ostreococcus lucimarinus	38.41	1.00e-63	235.00
IUUC-Pop-099611	Populus trichocarpa	56.25	5.00e-151	527.00
IUUC-Ppe-101845	Prunus persica	55.37	2.00e-139	488.00
IUUC-Smo-109625	Selaginella moellendorffii	62.47	9.00e-170	590.00
IUUC-Sit-109798	Setaria italica	54.91	2.00e-149	522.00
IUUC-Sly-111333	Solanum lycopersicum	57.80	2.00e-153	535.00
IUUC-Sbi-113982	Sorghum bicolor	55.53	3.00e-143	501.00
IUUC-Tca-121521	Theobroma cacao	57.49	1.00e-155	543.00
IUUC-Tae-125546	Triticum aestivum	53.53	4.00e-143	501.00
IUUC-Tur-126423	Triticum urartu	64.62	2.00e-135	476.00
IUUC-Vvi-130927	Vitis vinifera	56.96	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence