iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113819

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G027200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g002790	Sb06g002790.1	Sb06g002790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-07	30.2	649	690

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ed+   +d +  l+CgH fh+ C+++w         + +CP+C+
   Q: 649  CCICQEDYvegED-LGRLDCGHDFHTGCIKQW------LVIKNLCPICK 690
           ********77655.66799*************......999*******6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQHNRITMLS SSETCQLGSS SSNPVMDQQN LLPNNSNVDE QILLPNALEH EDYPHYLLNS 60
HEVGMPSGSL IGQQNTSLSL WEPAGSSSMG CLVDHGNFFQ AKRDHLASSL SIGGPLSIDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATACATTCG AGCACGCCGG ACGCGGTCGG AAGGGGACAA AGCAGCAAGC GGCGCCGGGC 60
TCCCCCCCGT CTCCCTTCCC TTCCTCGCCC CCGATCGACG CCGATCGGGG CCGACTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_06g002790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000325	Aegilops tauschii	60.55	0.00e+00	755.00
IUUC-Aly-006551	Arabidopsis lyrata	53.98	3.00e-51	195.00
IUUC-Ath-007241	Arabidopsis thaliana	53.98	6.00e-51	194.00
IUUC-Bdi-014124	Brachypodium distachyon	64.72	0.00e+00	771.00
IUUC-Bol-015243	Brassica oleracea	54.65	6.00e-50	191.00
IUUC-Bra-017627	Brassica rapa	55.21	3.00e-49	189.00
IUUC-Gma-042748	Glycine max	44.76	6.00e-51	194.00
IUUC-Hvu-047680	Hordeum vulgare	47.84	5.00e-53	201.00
IUUC-Lpe-051474	Leersia perrieri	62.26	0.00e+00	796.00
IUUC-Mtr-057649	Medicago truncatula	45.42	5.00e-44	171.00
IUUC-Mac-065663	Musa acuminata	43.19	3.00e-66	244.00
IUUC-Oba-075898	Oryza barthii	62.80	0.00e+00	781.00
IUUC-Obr-076185	Oryza brachyantha	58.90	0.00e+00	751.00
IUUC-Ogl-077587	Oryza glaberrima	62.66	0.00e+00	779.00
IUUC-Ogu-078729	Oryza glumaepatula	63.08	0.00e+00	784.00
IUUC-Oin-079127	Oryza indica	62.61	0.00e+00	751.00
IUUC-Olo-080490	Oryza longistaminata	62.32	0.00e+00	745.00
IUUC-Ome-081451	Oryza meridionalis	62.80	0.00e+00	780.00
IUUC-Oni-082106	Oryza nivara	62.94	0.00e+00	783.00
IUUC-Opu-084108	Oryza punctata	63.27	0.00e+00	762.00
IUUC-Oru-085229	Oryza rufipogon	62.80	0.00e+00	781.00
IUUC-Osa-085404	Oryza sativa	62.80	0.00e+00	781.00
IUUC-Pop-098817	Populus trichocarpa	48.05	1.00e-53	203.00
IUUC-Ppe-101866	Prunus persica	54.60	1.00e-51	197.00
IUUC-Sit-110290	Setaria italica	81.10	0.00e+00	1017.00
IUUC-Sly-111039	Solanum lycopersicum	47.35	3.00e-54	205.00
IUUC-Stu-112737	Solanum tuberosum	53.14	1.00e-50	193.00
IUUC-Tca-121625	Theobroma cacao	47.95	3.00e-54	205.00
IUUC-Tae-123850	Triticum aestivum	62.69	0.00e+00	768.00
IUUC-Tur-126323	Triticum urartu	61.95	0.00e+00	751.00
IUUC-Vvi-131306	Vitis vinifera	37.95	8.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence