iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113857

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G428100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g040220	Sb01g040220.1	Sb01g040220.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	55.60	3.00e-77	278.00	IUUC-Ots-000003

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAFFSHHHLQ QPHPQQAPPP HQQQPVLPSF RNALPVPVDG QIPAPLTFFN PPPAFPEQPA 60
QAPLVDAMGL TAAAGLGWRQ PREQELLGEN SQMSSIDFLQ TGSAVSTGLA LSLEDRRHGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATTTCGTC GTCTCTCGCT CCCTCGGTCC CTCCCCCCTT CTCCCCCGCT CCTTTCCCCT 60
CACCTCGCCA TCTCCTTGTT CCTCACCTCG CCATGGCGTT CTTCTCTCAC CACCATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR017066--E3ligase_BOI
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031347--P:regulation of defense response

KEGG

sbi:SORBI_01g040220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005929	Arabidopsis lyrata	45.82	2.00e-65	241.00
IUUC-Ath-006778	Arabidopsis thaliana	45.51	6.00e-66	243.00
IUUC-Bdi-014116	Brachypodium distachyon	84.57	2.00e-139	487.00
IUUC-Bol-015347	Brassica oleracea	43.95	4.00e-63	233.00
IUUC-Bra-016774	Brassica rapa	43.73	3.00e-65	240.00
IUUC-Gac-042116	Gasterosteus aculeatus	29.17	9.00e-09	53.90
IUUC-Gma-043285	Glycine max	48.94	2.00e-80	291.00
IUUC-Hvu-047269	Hordeum vulgare	85.44	1.00e-133	468.00
IUUC-Lpe-051303	Leersia perrieri	88.39	4.00e-140	489.00
IUUC-Mtr-058265	Medicago truncatula	50.91	8.00e-84	302.00
IUUC-Mac-065593	Musa acuminata	62.66	3.00e-86	310.00
IUUC-Oba-075579	Oryza barthii	86.80	2.00e-143	500.00
IUUC-Obr-076524	Oryza brachyantha	85.17	7.00e-129	452.00
IUUC-Ogl-077898	Oryza glaberrima	86.80	2.00e-143	500.00
IUUC-Ogu-078555	Oryza glumaepatula	86.51	8.00e-143	498.00
IUUC-Oin-079703	Oryza indica	86.51	6.00e-143	499.00
IUUC-Olo-080483	Oryza longistaminata	84.62	2.00e-87	316.00
IUUC-Ome-081181	Oryza meridionalis	87.06	1.00e-143	501.00
IUUC-Oni-082858	Oryza nivara	85.13	1.00e-142	498.00
IUUC-Opu-083786	Oryza punctata	87.74	4.00e-139	486.00
IUUC-Oru-084527	Oryza rufipogon	86.55	3.00e-144	503.00
IUUC-Osa-085603	Oryza sativa	87.10	3.00e-144	503.00
IUUC-Pop-099481	Populus trichocarpa	50.47	3.00e-63	234.00
IUUC-Ppe-101900	Prunus persica	48.18	1.00e-65	242.00
IUUC-Smo-109461	Selaginella moellendorffii	42.13	7.00e-40	156.00
IUUC-Sit-110713	Setaria italica	97.14	3.00e-97	346.00
IUUC-Sly-110962	Solanum lycopersicum	50.62	1.00e-63	235.00
IUUC-Stu-112121	Solanum tuberosum	50.62	1.00e-63	235.00
IUUC-Tca-121810	Theobroma cacao	50.91	7.00e-56	209.00
IUUC-Tae-124526	Triticum aestivum	85.44	4.00e-136	476.00
IUUC-Tur-126776	Triticum urartu	78.20	1.00e-96	346.00
IUUC-Vvi-131727	Vitis vinifera	57.44	3.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence