iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043393

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000839

Gene Name

LOC100820578; GLYMA_06G316600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G47400	GLYMA06G47400.1	GLYMA06G47400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-08	34.3	338	380
UBD/Alpha-Helix/CUE	1.50e-08	36.1	548	586

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + l+C+H+fh+ Cl  w  l +      +CP+Cr
   Q: 338  CAICREPMAK-AKRLNCNHLFHLACLRSW--LDQGLAEMYTCPTCR 380
           ********99.888***************..777899999*****8 PP

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLeg 42
             ++e+++e++P+ +++ i ++L ++t+s++ +vnnLL++
   Q: 548  LAMAETVREVLPHIPDDMIFQDL-QRTNSVTVTVNNLLQM 586
           579********************.**************98 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MALRVIAISA VSTVLSFVGL QFCTDLSLDK LTSDGLIGWN LIHLDNASQD IELPLGLYTT 60
IGLLVNCMIN VFILLNLCLK AVFFTELYAS ETRKLVERFI NYVIYKGMFL PLIVPPTIYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCAATTTT ACCAAGCAAC CTAAATTAAA TTCTCGCAAA AATATATATA TAGTTTCTCT 60
TTTTCTTTTT CAATATCTCT ACCTAATTTC TGTCTCTCTC TCTTCTGTAT TTGTCTTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100820578

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	38.65	1.00e-23	102.00
IUUC-Atr-003008	Amborella trichopoda	55.91	0.00e+00	633.00
IUUC-Aly-006287	Arabidopsis lyrata	66.38	0.00e+00	802.00
IUUC-Ath-006950	Arabidopsis thaliana	66.55	0.00e+00	779.00
IUUC-Bol-015123	Brassica oleracea	66.61	0.00e+00	773.00
IUUC-Bra-017662	Brassica rapa	65.87	0.00e+00	727.00
IUUC-Fal-036758	Ficedula albicollis	24.08	8.00e-34	138.00
IUUC-Mtr-058643	Medicago truncatula	85.74	0.00e+00	1051.00
IUUC-Mac-065495	Musa acuminata	54.23	6.00e-161	560.00
IUUC-Obr-076485	Oryza brachyantha	50.89	4.00e-128	451.00
IUUC-Ogu-078481	Oryza glumaepatula	39.79	7.00e-92	331.00
IUUC-Ome-081941	Oryza meridionalis	42.08	4.00e-101	361.00
IUUC-Oni-082488	Oryza nivara	39.18	5.00e-89	322.00
IUUC-Opu-083500	Oryza punctata	44.80	7.00e-104	370.00
IUUC-Osa-085509	Oryza sativa	50.19	3.00e-131	461.00
IUUC-Ola-087152	Oryzias latipes	25.83	4.00e-32	132.00
IUUC-Ppa-095969	Physcomitrella patens	45.05	7.00e-122	431.00
IUUC-Pfo-096810	Poecilia formosa	27.84	3.00e-31	130.00
IUUC-Pop-099346	Populus trichocarpa	70.31	0.00e+00	827.00
IUUC-Ppe-102033	Prunus persica	72.74	0.00e+00	838.00
IUUC-Smo-109664	Selaginella moellendorffii	45.12	1.00e-112	400.00
IUUC-Sit-110161	Setaria italica	51.27	2.00e-139	488.00
IUUC-Sly-111850	Solanum lycopersicum	64.63	0.00e+00	713.00
IUUC-Sbi-113957	Sorghum bicolor	50.47	2.00e-141	496.00
IUUC-Tca-121783	Theobroma cacao	72.91	0.00e+00	863.00
IUUC-Tae-125510	Triticum aestivum	47.73	4.00e-103	368.00
IUUC-Vvi-130989	Vitis vinifera	72.23	0.00e+00	854.00
IUUC-Xma-133943	Xiphophorus maculatus	27.56	9.00e-31	128.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence