iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/A20	A20	21293909; 23952686

Organism

Arabidopsis thaliana

Functional Description
(View)

May be involved in environmental stress response.

Protein Sequence
(Fasta)

MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES 60
GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR CSGCRKKVGL TGFRCRCGEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTTTTT GTTTTTCCCT AAAGTAAAAA ATAAAAATCT AACATGTCCG AAGTCGAACC 60
AAACATAAAC ATACAGGTGT TCGAAACTAG TTAACACAAT AACACCTCTA GATATATATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002653--Znf_A20
IPR000058--Znf_AN1

PROSITE

PS51036--ZF_A20
PS51039--ZF_AN1

Pfam

PF01754--zf-A20
PF01428--zf-AN1

SMART

SM00259--ZnF_A20
SM00154--ZnF_AN1

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
GO:0016567--P:protein ubiquitination
GO:0006970--P:response to osmotic stress
GO:0009414--P:response to water deprivation

KEGG

ath:AT3G12630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001022	Aegilops tauschii	48.28	3.00e-32	130.00
IUUC-Atr-002550	Amborella trichopoda	79.03	9.00e-28	115.00
IUUC-Aly-006127	Arabidopsis lyrata	94.41	7.00e-77	278.00
IUUC-Ame-011232	Astyanax mexicanus	64.52	2.00e-20	91.70
IUUC-Bdi-014732	Brachypodium distachyon	80.77	9.00e-23	99.00
IUUC-Bol-016379	Brassica oleracea	87.50	2.00e-70	256.00
IUUC-Bra-016759	Brassica rapa	90.00	3.00e-63	233.00
IUUC-Cin-025685	Ciona intestinalis	56.45	2.00e-19	87.80
IUUC-Eeu-034800	Erinaceus europaeus	62.90	7.00e-20	89.70
IUUC-Gac-041529	Gasterosteus aculeatus	62.90	6.00e-21	93.20
IUUC-Gma-043029	Glycine max	57.14	9.00e-45	171.00
IUUC-Lch-050452	Latimeria chalumnae	57.33	3.00e-22	97.80
IUUC-Lpe-051441	Leersia perrieri	44.94	4.00e-30	123.00
IUUC-Meu-056305	Macropus eugenii	77.50	4.00e-16	77.00
IUUC-Mtr-058331	Medicago truncatula	53.89	9.00e-39	151.00
IUUC-Mac-064849	Musa acuminata	50.59	8.00e-26	108.00
IUUC-Ont-071590	Oreochromis niloticus	62.90	5.00e-21	93.60
IUUC-Oba-075925	Oryza barthii	43.53	7.00e-30	122.00
IUUC-Ogl-077095	Oryza glaberrima	43.53	7.00e-30	122.00
IUUC-Ogu-078649	Oryza glumaepatula	43.53	7.00e-30	122.00
IUUC-Oin-079398	Oryza indica	43.53	7.00e-30	122.00
IUUC-Ome-081188	Oryza meridionalis	44.38	1.00e-30	125.00
IUUC-Oni-082989	Oryza nivara	43.53	7.00e-30	122.00
IUUC-Opu-084150	Oryza punctata	44.97	3.00e-29	120.00
IUUC-Oru-084798	Oryza rufipogon	43.53	7.00e-30	122.00
IUUC-Osa-086093	Oryza sativa	43.53	7.00e-30	122.00
IUUC-Pfo-096681	Poecilia formosa	64.52	4.00e-21	94.00
IUUC-Pop-099120	Populus trichocarpa	56.76	4.00e-43	166.00
IUUC-Ppe-101754	Prunus persica	58.68	2.00e-44	171.00
IUUC-Sit-110305	Setaria italica	79.37	1.00e-27	115.00
IUUC-Sly-111918	Solanum lycopersicum	55.21	1.00e-45	174.00
IUUC-Stu-112079	Solanum tuberosum	53.12	1.00e-43	168.00
IUUC-Sbi-114215	Sorghum bicolor	82.54	4.00e-28	116.00
IUUC-Tru-118318	Takifugu rubripes	64.52	3.00e-21	94.40
IUUC-Tni-120421	Tetraodon nigroviridis	64.52	2.00e-21	95.10
IUUC-Tca-121297	Theobroma cacao	80.82	2.00e-33	134.00
IUUC-Tae-123362	Triticum aestivum	46.82	3.00e-30	123.00
IUUC-Tme-127203	Tuber melanosporum	30.16	2.30e-02	33.50
IUUC-Vvi-130864	Vitis vinifera	54.35	3.00e-40	157.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence